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5e7b739ed3
* Add initial files * add files * Move projects.aa_design -> rfd3 * Make format * Delete test files * Add configs * Mc * Fixed tests * remove test files
24 lines
552 B
YAML
24 lines
552 B
YAML
# base training dataset for training AF3 design models (atom14 variants):
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# protein subsampling only.
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defaults:
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- design_base
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- val/sm_binder_hbonds@val.sm_binder_hbonds
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- val/sm_binder_hbonds_short@val.sm_binder_hbonds_short
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- _self_
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# Datasets:
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train:
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pdb:
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probability: 0.9
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sub_datasets:
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interface:
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dataset:
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transform:
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crop_spatial_probability: 1.0
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# Should we do monomer for hbond? probably not, maybe small sampling so model learns something?
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monomer_distillation:
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probability: 0.1
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