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Peter Schmidtke
2024-04-08 09:52:17 +00:00
parent f792bff126
commit 146f76e8f8
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README.md
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@@ -81,10 +81,10 @@ docker build -t fpocket/fpocket .
This will build fpocket into your local fpocket/fpocket image. You can then run fpocket/mdpocket etc using:
```bash
docker run -v `pwd`:/WORKDIR fpocket/fpocket fpocket -f data/sample/1UYD.pdb
docker run -v `pwd`:/workdir fpocket/fpocket fpocket -f /workdir/yourfile.pdb
```
Here you mount your current directory with your input files into the preconfigured `/WORKDIR` in the docker container and then run fpocket on a file in that mounted folder.
Here you mount your current directory with your input files into the preconfigured `/workdir` in the docker container and then run fpocket on a file in that mounted folder. Make sure that the folder is writeable to others if you run it through docker.
### Installing