Commit Graph

1453 Commits

Author SHA1 Message Date
Maarten L. Hekkelman
95b007d38f Merge branch 'trunk' into develop 2025-09-24 11:38:01 +02:00
Maarten L. Hekkelman
b66f7a30ce Progress bar using WriteConsole on Windows 2025-09-24 11:36:37 +02:00
Maarten L. Hekkelman
ec7287c503 remove warning 2025-09-24 11:32:12 +02:00
Maarten L. Hekkelman
a41c591f0c Restore order of imports, avoid reordering by clang-format 2025-09-24 10:51:53 +02:00
Maarten L. Hekkelman
3a6527cdd5 yet another update on progress bar 2025-09-24 10:23:58 +02:00
Maarten L. Hekkelman
5f21a094c0 added flush to progress bar 2025-09-24 10:14:03 +02:00
Maarten L. Hekkelman
2203a1855d improved progress bar 2025-09-24 09:49:28 +02:00
Maarten L. Hekkelman
7edd2ecc18 new progress bar 2025-09-23 15:53:55 +02:00
Maarten L. Hekkelman
1d2953c850 Fix reconstruction, version bump 2025-09-22 13:51:18 +02:00
Maarten L. Hekkelman
dbf59ce622 reconstruct better when entity ID's are missing 2025-09-22 12:59:16 +02:00
Maarten L. Hekkelman
1596db8499 Merge branch 'develop' of github.com:pdb-redo/libcifpp into develop 2025-09-16 13:29:57 +02:00
Maarten L. Hekkelman
bd1fb5c5cd Added model::create_link 2025-09-16 13:29:51 +02:00
Maarten L. Hekkelman
da500025c3 swap atoms should swap type_symbol as well 2025-09-10 17:16:22 +02:00
Maarten L. Hekkelman
60eeea9a93 more resilient loading of dictionary data 2025-09-10 15:06:06 +02:00
Maarten L. Hekkelman
1220f01f1e change location of mmcif_ma.dic 2025-09-10 14:22:52 +02:00
Maarten L. Hekkelman
ad0a34fe98 Update changelog v9.0.2 2025-09-10 12:49:43 +02:00
Maarten L. Hekkelman
a7425ff1a0 Optimise validation code 2025-09-10 12:40:01 +02:00
Maarten L. Hekkelman
1ce25f86ae better check anisotrop atoms 2025-09-10 12:19:56 +02:00
Maarten L. Hekkelman
cd93f72b96 Merge branch 'develop' into better-create-entity-ids 2025-09-10 09:28:50 +02:00
Maarten L. Hekkelman
23500bd303 Fix reconstruction of really bare files 2025-09-10 09:25:49 +02:00
Maarten L. Hekkelman
14b4753b4f test for null 2025-09-09 19:55:13 +02:00
Maarten L. Hekkelman
4c37d5db5f use rowhandles 2025-09-09 19:52:39 +02:00
Maarten L. Hekkelman
fc2c4b4172 fix map::at in reconstruct sequences 2025-09-09 10:51:31 +02:00
Maarten L. Hekkelman
3ac64de16b Version bump, update changelog v9.0.1 2025-09-03 14:55:20 +02:00
Maarten L. Hekkelman
45eecd72b0 using pkg-config, when available 2025-09-03 14:24:29 +02:00
Maarten L. Hekkelman
d1dd558cda as object lib 2025-09-03 14:00:22 +02:00
Maarten L. Hekkelman
d19e2c2196 Update pcre2s 2025-09-03 13:11:45 +02:00
Maarten L. Hekkelman
72c7aca074 revert to catch2 version 2, due to linker errors on Windows? 2025-09-03 13:04:13 +02:00
Maarten L. Hekkelman
683a1087d0 Install catch2 before testing 2025-09-03 12:28:06 +02:00
Maarten L. Hekkelman
35bc139deb Update pcre2s 2025-09-03 11:39:00 +02:00
Maarten L. Hekkelman
45ece2fa0d pcre2 is no longer a depends on Windows 2025-09-03 11:18:04 +02:00
Maarten L. Hekkelman
11c98f553f Update Catch2 to version 3
Updated pcre2s
2025-09-03 11:15:31 +02:00
Maarten L. Hekkelman
28aa9b1036 Using pcre2s 2025-09-03 11:07:02 +02:00
Maarten L. Hekkelman
d7b5c0a748 remove message 2025-09-02 15:21:04 +02:00
Maarten L. Hekkelman
065e7f5f18 added clang format file 2025-09-02 14:59:28 +02:00
Maarten L. Hekkelman
4b1623cfdc pcre2 again 2025-09-02 14:57:07 +02:00
Maarten L. Hekkelman
1de973ddcb Fix findpcre2 cmake file v9.0.0 2025-09-02 13:12:20 +02:00
Maarten L. Hekkelman
eecc801203 last remaining warning 2025-09-02 12:57:08 +02:00
Maarten L. Hekkelman
5c50154ea4 Merge branch 'develop' of github.com:PDB-REDO/libcifpp into develop 2025-09-02 12:54:03 +02:00
Maarten L. Hekkelman
0fa3d6aa94 Removing warning using MSVC 2025-09-02 12:54:07 +02:00
Maarten L. Hekkelman
01f5242bfb Revert "Add formatting file"
This reverts commit af6d8d4f71.
2025-09-02 11:57:21 +02:00
Maarten L. Hekkelman
af6d8d4f71 Add formatting file 2025-09-02 11:47:50 +02:00
Maarten L. Hekkelman
fa8285fc0f use std::format anyway, even if __cpp_lib_format is not defined. 2025-09-02 10:23:00 +02:00
Maarten L. Hekkelman
2e7f6b8337 cross platform check for lib format 2025-09-02 10:03:36 +02:00
Maarten L. Hekkelman
a6a55020eb Merge branch 'develop' of github.com:PDB-REDO/libcifpp into develop 2025-09-01 10:54:09 +02:00
Maarten L. Hekkelman
0e84ea454d fmt fix 2025-09-01 10:53:29 +02:00
Maarten L. Hekkelman
f3bf211d45 pdb formatting 2025-09-01 09:34:07 +02:00
Maarten L. Hekkelman
f5ef44836c pdb formatting 2025-09-01 09:31:22 +02:00
Maarten L. Hekkelman
070124b6e1 fix cif2pdb 2025-08-29 14:00:27 +02:00
Maarten L. Hekkelman
c8a46fcdd9 Stop when element is missing in reading PDB input 2025-08-29 13:17:17 +02:00