22 Commits

Author	SHA1	Message	Date
Geoffrey Yu	e963726b63	update train_mmcifs_cache so that now only use one structure for testing	2023-08-03 14:23:52 +02:00
Geoffrey Yu	139ea9a6ff	removed old data and script for permutation unittest. now working on the new permutation unittest	2023-08-03 14:15:25 +02:00
Geoffrey Yu	e2193f7718	removed unused alignment files	2023-08-03 14:11:37 +02:00
Geoffrey Yu	a1ef4c8fa9	added train_mmcifs_cache.json	2023-07-21 13:55:09 +02:00
Geoffrey Yu	d7162be46a	update test files	2023-07-21 13:19:21 +02:00
Dingquan Yu	dbc0b0858a	added test alignment files for dataloader unittest	2023-07-16 14:55:11 +02:00
Dingquan Yu	39d67ba5c8	remove unnecessary test files	2023-07-16 14:21:56 +02:00
Geoffrey Yu	a400035869	added small test, train, and validation alignment files	2023-07-06 17:01:38 +02:00
Geoffrey Yu	a741b42ad0	added example label files	2023-06-24 15:47:04 +02:00
Gustaf Ahdritz	b4b849af15	Restore sample feat file	2022-06-22 23:13:03 -04:00
Sam DeLuca	fcee03aa6b	wip	2022-06-21 16:23:08 +00:00
Gustaf Ahdritz	fb02f39ad8	Remove unnecessary symlink	2022-02-01 16:07:58 -05:00
Gustaf Ahdritz	e3daf72445	Overhaul transformation code for better parity w/ AlphaFold	2022-01-03 16:47:38 -05:00
Gustaf Ahdritz	14cce39a8c	Add data pipeline test	2021-12-30 22:47:34 -05:00
Gustaf Ahdritz	9680943352	Change name of test data directory	2021-12-30 20:25:33 -05:00
Gustaf Ahdritz	079baeb72e	Add sample feature dict	2021-12-30 19:52:21 -05:00
Gustaf Ahdritz	85d39c8086	Add more sample data	2021-12-30 19:51:01 -05:00
Sachin Kadyan	8923e53619	Added tests for squeeze_features.	2021-12-21 07:38:58 -04:00
Sachin Kadyan	9e4fb16f27	Added a pickle file of protein features, for use during tests.	2021-12-21 05:46:32 -04:00
Gustaf Ahdritz	a933bc7479	Add sample features	2021-11-14 16:41:40 -05:00
Gustaf	36f317bef9	Add MMseqs2 MSA generation	2021-11-09 02:57:53 -05:00
Gustaf Ahdritz	92f1932e6b	Initial commit	2021-09-17 18:34:59 -04:00