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update FasterForest to 2.9.1, bump JUnit Jupiter to 6.0.3, and add NativePanama flattened eval tests

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rdk
2026-02-23 00:35:18 +01:00
parent 4aaf212b9b
commit f3fc9329bc
5 changed files with 7 additions and 6 deletions
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4
build.gradle
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@@ -215,13 +215,13 @@ dependencies {
implementation 'org.openscience.cdk:cdk-silent:2.11' // for Atom class
implementation 'cz.cuni.cusbg:faster-molecular-surface:1.0'
implementation 'cz.siret.prank:FasterForest:2.8.1'
implementation 'cz.siret.prank:FasterForest:2.9.1'
implementation 'nz.ac.waikato.cms.weka:weka-dev:3.9.6'
implementation fileTree(dir: 'lib', include: '*.jar')
testImplementation 'org.junit.jupiter:junit-jupiter:6.0.2'
testImplementation 'org.junit.jupiter:junit-jupiter:6.0.3'
testRuntimeOnly 'org.junit.platform:junit-platform-launcher'
}

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lib/local-mvn-repo/cz/siret/prank/FasterForest/2.8.1/FasterForest-2.8.1.jar
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lib/local-mvn-repo/cz/siret/prank/FasterForest/2.9.1/FasterForest-2.9.1.jar Normal file
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2
lib/local-mvn-repo/cz/siret/prank/FasterForest/2.8.1/FasterForest-2.8.1.pom → lib/local-mvn-repo/cz/siret/prank/FasterForest/2.9.1/FasterForest-2.9.1.pom
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@@ -9,7 +9,7 @@
<modelVersion>4.0.0</modelVersion>
<groupId>cz.siret.prank</groupId>
<artifactId>FasterForest</artifactId>
<version>2.8.1</version>
<version>2.9.1</version>
<dependencies>
<dependency>
<groupId>org.apache.commons</groupId>

7
misc/test-scripts/testsets.sh
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@@ -211,10 +211,11 @@ eval_predict_flattened() {
title EVALUATING PREDICTIONS WITH FLATTENED FOREST
test ./prank.sh eval-predict joined.ds -c config/test-default -rf_flatten 1 -out_subdir TEST/EVAL_FLATTENED
test ./prank.sh eval-predict coach420.ds -c config/test-default -rf_flatten 1 -out_subdir TEST/EVAL_FLATTENED
test ./prank.sh eval-predict holo4k.ds -c config/test-default -rf_flatten 1 -out_subdir TEST/EVAL_FLATTENED
test ./prank.sh eval-predict joined.ds -c config/test-default -rf_flatten 1 -rf_flatten_target FlatBinaryForest -out_subdir TEST/EVAL_FLATTENED
test ./prank.sh eval-predict coach420.ds -c config/test-default -rf_flatten 1 -rf_flatten_target FlatBinaryForest -out_subdir TEST/EVAL_FLATTENED
test ./prank.sh eval-predict holo4k.ds -c config/test-default -rf_flatten 1 -rf_flatten_target FlatBinaryForest -out_subdir TEST/EVAL_FLATTENED -l FlatBinaryForest
test ./prank.sh eval-predict holo4k.ds -c config/test-default -rf_flatten 1 -rf_flatten_target NativePanamaForest -out_subdir TEST/EVAL_FLATTENED_NATIVE
}