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126a0653f0
Move misc/tutorials/ to documentation/ and add index readme. Update rescoring.md: add quick-start examples, paper links for all methods, add Pocketeer to supported methods list. Fix stale links in README.md (tutorials path, local-env.sh typo).
1.5 KiB
1.5 KiB
More prediction examples
predict using the model trained with conservation
./prank.sh eval-predict ../p2rank-datasets/coach420.ds -l conserv -out_subdir CONS \
-c distro/config/conservation_hmm \
-conservation_dir 'coach420/conservation/e5i1/scores' \
-fail_fast 1 \
-visualizations 0 | ./logc.sh
./prank.sh eval-predict ../p2rank-datasets/holo4k.ds -l conserv -out_subdir CONS \
-c distro/config/conservation_hmm \
-conservation_dir 'holo4k/conservation/e5i1/scores' \
-fail_fast 1 \
-visualizations 0 | ./logc.sh
./prank.sh eval-predict ../p2rank-datasets/joined.ds -l conserv -out_subdir CONS \
-c distro/config/conservation_hmm \
-conservation_dir 'joined/conservation/e5i1/scores' \
-fail_fast 1 \
-visualizations 0 | ./logc.sh
./prank.sh eval-predict ../p2rank-datasets/fptrain.ds -l conserv -out_subdir CONS \
-c distro/config/conservation_hmm \
-conservation_dir 'fptrain/conservation/e5i1/scores' \
-fail_fast 1 \
-visualizations 0 | ./logc.sh
# same but with default model
./prank.sh eval-predict ../p2rank-datasets/coach420.ds -l default \
-fail_fast 1 \
-visualizations 0
./prank.sh eval-predict ../p2rank-datasets/holo4k.ds -l default \
-fail_fast 1 \
-visualizations 0
./prank.sh eval-predict ../p2rank-datasets/joined.ds -l default \
-fail_fast 1 \
-visualizations 0
./prank.sh eval-predict ../p2rank-datasets/fptrain.ds -l default \
-fail_fast 1 \
-visualizations 0