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cpp11
pymol-open-source/layer2
History
Anton Butsev 442d7ca981 View/color salt-bridge interactions differently from hydrogen bonds (PYMOL-3846)
2024-01-30 12:57:54 -05:00
..
AssemblyHelpers.cpp
Refactor: Doxygen comments, ObjectMoleculeUpdateNeighbors
2021-01-14 15:23:06 +01:00
AssemblyHelpers.h
refactor: lexborrow_t
2018-11-15 16:27:43 +01:00
AtomInfo.cpp
Replace OV (AtomInfo)
2021-07-07 12:19:24 -04:00
AtomInfo.h
enum cAtomProtected_* (#316)
2023-09-25 12:18:38 -04:00
AtomInfoHistory.cpp
clang-tidy modernize-use-nullptr
2019-01-18 10:04:10 +01:00
AtomInfoHistory.h
refactor: AtomInfoHistory lexidx_int_t
2018-11-15 16:09:57 +01:00
AtomNeighbors.h
Refactor ObjectMolecule::Neighbor access
2021-04-28 04:34:33 -04:00
BondTypeHistory.cpp
PYMOL-3570 Bonds to crystal symmetry mates
2021-02-11 18:58:26 +01:00
BondTypeHistory.h
PYMOL-3570 Bonds to crystal symmetry mates
2021-02-11 18:58:26 +01:00
CifBondDict.h
PYMOL-3318 _chem_comp_atom.alt_atom_id
2019-11-27 14:45:18 +01:00
CifFile.cpp
Crash reading some .cif files with Windows line endings
2020-10-18 21:55:28 -07:00
CifFile.h
Improve CIF file error handling (PYMOL-3501)
2020-08-04 14:02:34 +02:00
CifMoleculeReader.cpp
PYMOL-4014 Respect quiet argument for cif load
2024-01-30 12:06:24 -05:00
CoordSet.cpp
New setting: cell_centered (#259)
2022-10-05 11:15:15 -04:00
CoordSet.h
pbc_wrap/pbc_unwrap, smooth+intra_fit pbc support
2021-03-26 14:04:35 +01:00
DistSet.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
DistSet.h
Refactor LabPos VLA to std::vector
2020-12-03 18:25:31 +01:00
GadgetSet.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
GadgetSet.h
SceneClick logic extraction and misc improvements
2020-11-11 16:53:13 +01:00
HydrogenAdder.cpp
Refactor ObjectMolecule::Neighbor access
2021-04-28 04:34:33 -04:00
HydrogenAdder.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
MmodTyping.cpp
Refactor: Doxygen comments, ObjectMoleculeUpdateNeighbors
2021-01-14 15:23:06 +01:00
MmodTyping.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
MmtfMoleculeReader.cpp
MMTF loader: Use entityList for HETATM flag (#296)
2023-07-18 11:51:18 -04:00
Mol2Typing.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
Mol2Typing.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
MolV3000.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
MolV3000.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
ObjectAlignment.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectAlignment.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectCallback.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
ObjectCallback.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectCGO.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectCGO.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectDist.cpp
View/color salt-bridge interactions differently from hydrogen bonds (PYMOL-3846)
2024-01-30 12:57:54 -05:00
ObjectDist.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectGadget.cpp
Remove OOMac
2021-07-07 12:03:25 -04:00
ObjectGadget.h
RenderContext enum class
2021-04-28 05:13:30 -04:00
ObjectGadgetRamp.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
ObjectGadgetRamp.h
Refactor: Remove fFree methods
2020-10-16 11:14:05 +02:00
ObjectGroup.cpp
Remove OOMac
2021-07-07 12:03:25 -04:00
ObjectGroup.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectMap.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectMap.h
load_raw dx support
2021-02-18 19:33:11 +01:00
ObjectMesh.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectMesh.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectMolecule2.cpp
Remove OOMac
2021-07-07 12:03:25 -04:00
ObjectMolecule3.cpp
pbc_wrap/pbc_unwrap, smooth+intra_fit pbc support
2021-03-26 14:04:35 +01:00
ObjectMolecule3.h
pbc_wrap/pbc_unwrap, smooth+intra_fit pbc support
2021-03-26 14:04:35 +01:00
ObjectMolecule.cpp
halogen-bond detection and display (PYMOL-3466)
2024-01-30 12:46:06 -05:00
ObjectMolecule.h
halogen-bond detection and display (PYMOL-3466)
2024-01-30 12:46:06 -05:00
ObjectSlice.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectSlice.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectSurface.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
ObjectSurface.h
Place CObject in pymol namespace
2021-02-11 19:14:06 +01:00
ObjectVolume.cpp
Specify color ramp for volume state
2023-07-20 12:07:03 -04:00
ObjectVolume.h
Specify color ramp for volume state
2023-07-20 12:07:03 -04:00
RepAngle.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepAngle.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepCartoon.cpp
Fix crash when loading discrete object (#261)
2022-10-05 21:41:48 -04:00
RepCartoon.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepCylBond.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepCylBond.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepDihedral.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepDihedral.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepDistDash.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepDistDash.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepDistLabel.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepDistLabel.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepDot.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepDot.h
PYMOL-3533 Refactor Rep as polymorphic type (2)
2020-09-30 09:46:26 +02:00
RepEllipsoid.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepEllipsoid.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepLabel.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepLabel.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepMesh.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepMesh.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepNonbonded.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepNonbonded.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepNonbondedSphere.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepNonbondedSphere.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepRibbon.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepRibbon.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSphere.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepSphere.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSphereGenerate.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSphereGenerate.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSphereImmediate.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSphereImmediate.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepSurface.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepSurface.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
RepWireBond.cpp
Generic CGO Render
2022-03-08 15:16:16 -05:00
RepWireBond.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
Sculpt.cpp
enum cAtomProtected_* (#316)
2023-09-25 12:18:38 -04:00
Sculpt.h
Updated CShaker class
2019-08-30 11:55:32 +02:00
SculptCache.cpp
refactor SculptCache
2019-12-09 17:34:45 +01:00
SculptCache.h
refactor SculptCache
2019-12-09 17:34:45 +01:00
SideChainHelper.cpp
Refactor: Doxygen comments, ObjectMoleculeUpdateNeighbors
2021-01-14 15:23:06 +01:00
SideChainHelper.h
segi, resn, name of arbitrary length; settings in iterate/alter
2015-12-14 19:11:12 +00:00
VFont.cpp
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00
VFont.h
Forward decls/Move headers to source
2021-08-20 11:24:10 -04:00