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  • 02b2d63c3b Update download_weights.sh main Jun Liu 2026-05-28 17:14:20 +08:00
  • ac4d021c22 Delete download_weights.sh Jun Liu 2026-05-28 11:32:47 +08:00
  • dd32ff4875 Update readme.md Jun Liu 2026-05-28 11:30:52 +08:00
  • 186e9f25c5 Update README.md Jun Liu 2026-05-28 11:26:49 +08:00
  • dc75097b76 Add download_weights.sh script Jun Liu 2026-05-28 11:25:41 +08:00
  • bcfd36c046 Update README.md Jun Liu 2026-05-28 11:25:08 +08:00
  • 63bcc5f1d4 Create download_weights.sh Jun Liu 2026-05-28 11:20:41 +08:00
  • 22d5ae313c Update download.sh Jun Liu 2026-05-28 11:19:04 +08:00
  • 045d0b7e11 Update README.md Jun Liu 2026-05-28 11:05:01 +08:00
  • 46a74ac4df Update README.md Jun Liu 2026-05-28 11:02:14 +08:00
  • 21661dbc11 Delete data/download_dataset.sh Jun Liu 2026-05-28 10:27:11 +08:00
  • d4479f68a7 Update download_dataset.sh Jun Liu 2026-05-28 10:26:49 +08:00
  • c2a4d5d1f9 Update README.md Jun Liu 2026-03-12 11:51:49 +08:00
  • f68ef6ae2f Update README.md Jun Liu 2026-03-12 11:51:02 +08:00
  • 11c94e5409 Update README.md Jun Liu 2026-03-12 11:50:29 +08:00
  • c6ef49022b Update dataset links and formatting in readme v1.0.0 Jun Liu 2025-12-05 17:17:39 +08:00
  • a1be0b9eff Update readme.md Jun Liu 2025-12-05 17:17:14 +08:00
  • ecfa0f6f0c Update fmt.Println output to 'Goodbye World' Jun Liu 2025-12-05 17:15:30 +08:00
  • 390a89fc80 Add files via upload Jun Liu 2025-12-05 17:12:29 +08:00
  • c1c5add8db Create fly_test.coorrected.tsv Jun Liu 2025-12-05 17:12:03 +08:00
  • e7eb8af82e Fix link formatting in readme.md Jun Liu 2025-12-05 17:11:11 +08:00
  • 1c2d59b8c3 Update readme.md Jun Liu 2025-12-05 17:10:39 +08:00
  • 339ce03a0f Delete data/pplm directory Jun Liu 2025-12-05 16:44:37 +08:00
  • 37b4f08d98 Create README.md Jun Liu 2025-12-05 16:42:10 +08:00
  • 0adf02fed8 Create readme.md Jun Liu 2025-12-05 16:33:09 +08:00
  • 90086d6fa9 Update README.md Jun Liu 2025-12-05 15:49:59 +08:00
  • f8efb38795 Update README.md Jun Liu 2025-12-05 15:49:25 +08:00
  • cb6d2a0910 Fix shebang and add gdown commands for downloads Jun Liu 2025-12-03 20:44:28 +08:00
  • 91aa326308 Update README.md Jun Liu 2025-12-03 20:42:41 +08:00
  • ce8bb6a0aa Update README.md Jun Liu 2025-12-03 20:19:24 +08:00
  • bc87920c88 Update README.md Jun Liu 2025-12-03 20:18:55 +08:00
  • a17f769c79 Update README.md Jun Liu 2025-11-30 09:39:52 +08:00
  • c084863920 Clean up README by removing webserver comment Jun Liu 2025-11-25 10:16:19 +08:00
  • 2fd8b5bde2 Update README.md Jun Liu 2025-11-25 10:15:24 +08:00
  • 93d754c541 Update README.md Jun Liu 2025-11-25 10:14:28 +08:00
  • f4dc558c57 Update README.md Jun Liu 2025-11-24 18:47:31 +08:00
  • d20371b7e9 Update README.md Jun Liu 2025-11-24 18:38:24 +08:00
  • 5b69791ba4 Update README.md Jun Liu 2025-11-24 18:32:04 +08:00
  • 051da78903 Update README.md Jun Liu 2025-11-24 18:13:37 +08:00
  • 09212bd24d Update README.md Jun Liu 2025-11-24 18:08:58 +08:00
  • e0c74201c0 Update README.md Jun Liu 2025-11-24 17:56:55 +08:00
  • 9cd9d6cd27 Update utils.py Jun Liu 2025-11-24 17:41:15 +08:00
  • 37caa67e02 Update run_pplm-contact2.py Jun Liu 2025-11-24 17:39:12 +08:00
  • 4fc3bb0814 Update run_pplm-contact.py Jun Liu 2025-11-24 17:38:43 +08:00
  • 8d33c75376 Update run_pplm-contact.py Jun Liu 2025-11-24 17:20:38 +08:00
  • cc549fc9ba Create download.sh Jun Liu 2025-11-24 16:42:56 +08:00
  • 3ee6cb493c Refactor model loading and update argument parser Jun Liu 2025-11-24 16:41:29 +08:00
  • 29ad4cdc0f Import PPLM_Affinity from model in __init__.py Jun Liu 2025-11-24 16:40:35 +08:00
  • 88fd266a20 Create model.py Jun Liu 2025-11-24 16:39:59 +08:00
  • 0c8c5f1ff9 Delete pplm_affinity directory Jun Liu 2025-11-24 16:38:02 +08:00
  • 836396b763 Update run_pplm-ppi.py Jun Liu 2025-11-24 16:37:43 +08:00
  • 2179c05e4f Create __init__.py Jun Liu 2025-11-24 16:35:18 +08:00
  • 7d87dbe134 Create model.py Jun Liu 2025-11-24 16:34:42 +08:00
  • 4e8da2b60d Delete pplm_ppi directory Jun Liu 2025-11-24 16:33:48 +08:00
  • 0ee8259650 Delete pplm_ppi/models directory Jun Liu 2025-11-24 16:32:11 +08:00
  • e64c8179b1 Add files via upload Jun Liu 2025-11-24 15:13:12 +08:00
  • d7c3627343 Update README.md Jun Liu 2025-10-31 14:23:23 +08:00
  • 067ec512e9 Update README.md Jun Liu 2025-10-31 14:21:39 +08:00
  • 4c1bef453d Update README.md Jun Liu 2025-10-31 14:16:13 +08:00
  • c278bf0ce0 Update README.md Jun Liu 2025-10-31 14:15:42 +08:00
  • 447d3b4235 Revise parameter download instructions in README Jun Liu 2025-10-31 14:14:26 +08:00
  • f18dd9811c Update README.md Jun Liu 2025-10-31 14:12:31 +08:00
  • 29e3003699 Fix image URL formatting in README.md Jun Liu 2025-10-28 10:29:33 +08:00
  • 7e2fecad22 Fix banner image URL in README Jun Liu 2025-10-28 10:28:47 +08:00
  • 5f9f73019e Update README.md Jun Liu 2025-07-06 10:48:01 +08:00
  • 6bbbd6c602 Update README.md Jun Liu 2025-07-04 18:27:22 +08:00
  • 25a70840db Create heterodimer.dmf.pdb Jun Liu 2025-07-04 17:05:28 +08:00
  • 22402f3343 Create heterodimer.af3.pdb Jun Liu 2025-07-04 17:04:44 +08:00
  • 2dd00eef58 Create heterodimer.afm.pdb Jun Liu 2025-07-04 17:04:07 +08:00
  • 1012e84c66 Create homodimer.dmf.pdb Jun Liu 2025-07-04 17:03:28 +08:00
  • 6adb8a5f58 Create homodimer.af3.pdb Jun Liu 2025-07-04 17:02:44 +08:00
  • 6e54c27c6e Create homodimer.afm.pdb Jun Liu 2025-07-04 17:02:12 +08:00
  • d51fa8a312 Update run_pplm-contact2.py Jun Liu 2025-07-04 17:00:52 +08:00
  • 377b0aadd3 Update README.md Jun Liu 2025-07-04 16:59:42 +08:00
  • de47afefcd Update README.md Jun Liu 2025-07-04 16:59:24 +08:00
  • 5cb80900b2 Create run_pplm-contact2.py Jun Liu 2025-07-04 16:55:20 +08:00
  • 72bf593509 Update utils.py Jun Liu 2025-07-04 16:43:11 +08:00
  • 2962b7c2db Create predict2.py Jun Liu 2025-07-04 16:42:13 +08:00
  • aa4548523a Update README.md Jun Liu 2025-06-25 16:37:21 +08:00
  • b08ac5e4d2 Update README.md Jun Liu 2025-06-25 16:34:49 +08:00
  • ccdc14acbf Update README.md Jun Liu 2025-06-25 16:29:08 +08:00
  • f4b94510b1 Update README.md Jun Liu 2025-06-25 16:25:14 +08:00
  • 1a5bb514ae Update download_dataset.sh Jun Liu 2025-06-24 17:24:51 +08:00
  • 3ffc88fdc5 Update README.md Jun Liu 2025-06-24 17:11:22 +08:00
  • 7b6f925233 Create protein.pdb Jun Liu 2025-06-24 16:56:12 +08:00
  • df59583920 Update config.py Jun Liu 2025-06-24 16:42:59 +08:00
  • b15448c97a Update README.md Jun Liu 2025-06-24 16:34:51 +08:00
  • a8da016c2e Update run_pplm-ppi.py Jun Liu 2025-06-24 15:08:17 +08:00
  • ba41b40674 Update README.md Jun Liu 2025-06-24 15:07:41 +08:00
  • cf6fea4661 Update environment.yml Jun Liu 2025-06-24 14:40:18 +08:00
  • 1344d77e1b Update download_dataset.sh Jun Liu 2025-06-24 14:27:58 +08:00
  • 261f4ec14f Update download_dataset.sh Jun Liu 2025-05-06 11:46:18 +08:00
  • ad437140a6 Update download_model.sh Jun Liu 2025-05-06 11:45:30 +08:00
  • 0901451cb9 Update download_model.sh Jun Liu 2025-05-06 11:45:14 +08:00
  • 6f4e06df51 Update download_model.sh Jun Liu 2025-05-06 11:44:58 +08:00
  • da7b4da4c2 Update download_model.sh Jun Liu 2025-05-06 11:44:24 +08:00
  • d562c0ef8e Update README.md Jun Liu 2025-05-06 11:42:36 +08:00
  • 3e59623e5c Delete example/protein.pdb Jun Liu 2025-04-28 20:36:52 +08:00
  • b1a55de09b Add files via upload Jun Liu 2025-04-28 20:36:19 +08:00
  • 5339911fed Create run_pplm-affinity.py Jun Liu 2025-04-28 20:35:12 +08:00