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9 Commits

Author SHA1 Message Date
Jérôme Tubiana
4557849375 Clean repo for publication #2 2022-05-25 15:27:58 +03:00
Jérôme Tubiana
7c13a16680 Clean repo for publication 2022-05-25 11:30:35 +03:00
Jérôme Tubiana
57414fb986 Large code update 
- Added support for multi-output networks including atomic filter, simplified feature extraction.
- Multiple retrainings for the review.
- Improvements on saliency analysis.
- Added pluggin for nglview
 2022-01-03 12:50:00 +02:00
Jérôme Tubiana
7e4093a293 3D filters 
- Added scripts for visualizing 3D filters.
- Added scripts for visualizing 3D neighborhoods.
- Change predict_feature.py API (added single input support).
 2021-11-22 18:26:59 +02:00
Jérôme Tubiana
9364b8fc38 bug fix 2021-10-31 16:01:15 +02:00
Jérôme Tubiana
162d696777 Various fixes 
- Fixed paths
- Uniclust 2020 is the default sequence database
- Few fixes to allow parallel processing of DSSP/MSAs.
 2021-10-31 10:37:01 +02:00
Jérôme Tubiana
b19ca5fa4a Added homology baseline 2021-10-13 16:12:35 +03:00
Jérôme Tubiana
5fdd84a260 First commit 2021-10-06 19:08:20 +03:00
Jérôme Tubiana
3e216d66f1 Initial commit 2021-08-18 11:18:29 +02:00