pub_soft/esm - esm - Gitea: Git with a cup of tea

mirror of https://github.com/evolutionaryscale/esm.git synced 2026-06-04 17:14:23 +08:00

Author	SHA1	Message	Date
Steve Chan	2a19c4edde	fix(forge): various merge errors for the new binary encoding format (#261 ) Co-authored-by: Steve Chan <>	2025-08-15 09:27:24 -07:00
Ishaan Mathur	b237fe781c	adding CI that checks for linting, typechecking, and runs tests (#257 )	2025-07-14 16:45:31 -04:00
Ishaan Mathur	e0669a4a05	Revert "adding CI" This reverts commit `ceacf4c199`.	2025-07-11 18:28:56 +00:00
Ishaan Mathur	ceacf4c199	adding CI	2025-07-11 18:25:59 +00:00
santiag0m	be185fb05e	Remove unused imports (#255 ) v3.2.1	2025-07-01 08:51:02 -05:00
santiag0m	28100a60fc	Update to 3.2.1 (#254 )	2025-07-01 08:35:37 -05:00
s22chan	32866c71c0	docs: update README TOC. (#244 )	2025-05-29 11:16:30 -07:00
Neil Thomas	494e2e1d5c	Remove tools notebooks upport v3.2.0	2025-04-08 00:52:47 +00:00
Neil Thomas	dc8d437db1	update np.array for numpy2 (#232 )	2025-04-04 17:13:26 -04:00
Neil Thomas	3fb1a6110d	3.2.0 - fix residue constants (#231 )	2025-04-04 13:55:40 -04:00
Chetan Mishra	6f3e9b1809	porting over 3.2.0 (#229 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2025-04-03 21:02:33 -04:00
santiag0m	eed38f2688	Add guided generation (#228 )	2025-04-01 17:21:33 -07:00
Chetan Mishra	3e7acde90a	ported over updates for 3.1.6 (#219 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai> v3.1.6	2025-03-13 11:19:03 -04:00
Jun Gong	d40007ea16	3.1.5post1	2025-03-07 08:46:03 -08:00
Jun Gong	58e56c7f6a	3.1.6 hotfix (#215 )	2025-03-06 17:57:39 -08:00
Chetan Mishra	145ffbfbfc	fix typo (#209 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2025-03-05 17:07:04 -05:00
Chetan Mishra	c6b8c342aa	ported over updates from internal (#208 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai> v3.1.5	2025-03-05 15:08:52 -05:00
Chetan Mishra	82b1431b7b	pulled into changes from internal (#198 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2025-02-26 15:52:25 -05:00
tina-z-jia	1b3e08025b	esm 3.1.3 release (#184 ) v3.1.3	2025-01-16 10:34:33 -08:00
tina-z-jia	5a1f4573bc	hidden states and flash attention (#168 ) v3.1.2	2024-12-19 14:49:40 -06:00
Tom Sercu	41af605958	Clarify License Terms in README.md and LICENSE.md	2024-12-09 11:17:13 -05:00
Robert Verkuil	8c91cc9191	Add ESM C SageMaker instructions to README	2024-12-07 04:58:03 +00:00
tina-z-jia	8127b99068	update esmc tokenizer and return hidden states (#160 ) Signed-off-by: tina-z-jia <145156075+tina-z-jia@users.noreply.github.com> v3.1.1	2024-12-06 11:29:31 -08:00
Neil Thomas	5604523746	Update README.md (#153 ) Signed-off-by: Neil Thomas <neil@evolutionaryscale.ai>	2024-12-04 16:51:09 -06:00
Tom Sercu	30eb9070f4	Update README.md (#151 ) Signed-off-by: Tom Sercu <tom.sercu@evolutionaryscale.ai>	2024-12-04 13:37:24 -05:00
halilakin	5f4a7a96dd	Update README.md Signed-off-by: halilakin <halilakin@gmail.com>	2024-12-04 08:57:17 -08:00
tina-z-jia	52dfab8821	Update README.md Signed-off-by: tina-z-jia <145156075+tina-z-jia@users.noreply.github.com>	2024-12-04 08:22:35 -08:00
Tina Jia	00ac076be5	model name lint v3.1.0	2024-12-04 16:05:32 +00:00
Tina Jia	a816981b02	esmc release	2024-12-04 15:56:15 +00:00
Zeming Lin	1561962f3e	v3.0.8 (#146 ) Co-authored-by: Zeming Lin <zeming@evolutionaryscale.ai> v3.0.8	2024-11-25 18:05:53 -05:00
Zeming Lin	39a3a6cb1e	Sync with open source and update version string to 3.0.7post1 (#131 ) Co-authored-by: Zeming Lin <zeming@evolutionaryscale.ai>	2024-10-23 01:25:52 -04:00
Jenna MacCarley	2b5defdc2d	Add missing files from v3.0.7 (#130 ) v3.0.7	2024-10-22 16:00:04 -04:00
Jenna MacCarley	3fd11564af	Add support for ProteinComplex (#125 )	2024-10-21 17:00:29 -04:00
Chetan Mishra	a46ffdc2fc	remove default data dirs (#121 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2024-10-16 14:06:12 -07:00
Chetan Mishra	4a8f80704e	Cm/remove hf req from tools noteboks (#118 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2024-10-16 13:22:47 -07:00
Chetan Mishra	111d48dccc	fixed typo in generate.ipynb, created a forge version, and formatted … (#117 ) Co-authored-by: chetan <chetan@evolutionaryscale.ai>	2024-10-07 13:08:28 -07:00
Chetan Mishra	fe1d9140bb	fixed missing dep and added testing guide (#113 )	2024-09-30 09:55:53 -04:00
Chetan Mishra	ab063bd393	Added aliases to open model (#112 )	2024-09-25 13:40:48 +02:00
santiag0m	2efdadfe77	Tools install from source (#104 )	2024-09-03 17:25:34 -07:00
santiag0m	e87f84912e	Fix imports in tools notebooks (#103 )	2024-09-03 16:47:13 -07:00
santiag0m	4a92fb222c	Update jupyter notebook tools (#102 )	2024-09-03 14:50:58 -07:00
Zeming Lin	1d66d81524	v3.0.4 (#95 ) Co-authored-by: Zeming Lin <zeming@evolutionaryscale.ai> v3.0.4	2024-08-30 15:39:37 -04:00
santiag0m	eadc104b9a	Initialize pyplot backend before drawing function annotations (#93 )	2024-08-29 16:45:45 -07:00
santiag0m	3887d47c38	Add widgets library (#90 )	2024-08-27 11:07:44 -07:00
Jun Gong	84d562d864	3.0.3 fixes (#83 ) v3.0.3	2024-08-12 18:22:39 -04:00
Jun Gong	0774600af0	3.0.3 (#80 )	2024-08-12 14:09:15 -04:00
Jun Gong	aaabedcf58	Add logits example (#77 )	2024-08-06 14:23:38 -04:00
Zeming Lin	542a71d2d1	Bump pyproject version	2024-08-06 16:31:34 +00:00
Zeming Lin	10077d8a8e	Fix examples/raw_forward.py	2024-08-06 16:17:44 +00:00
Jun Gong	8c0e910158	3.0.2 (#73 )	2024-08-06 11:33:54 -04:00

1 2

66 Commits