334 Commits

Author SHA1 Message Date
Peter Schmidtke
4bb0d8447f Merge pull request #180 from Discngine/fix_overflow
Fix overflow in pocket file writing.
4.2.3
2026-03-09 11:41:53 +01:00
xvlaurent
08480cca17 Fix overflow in pocket file writing. 2026-03-09 10:32:58 +00:00
Peter Schmidtke
6c7c55dfdd Merge pull request #157 from Discngine/issue-151
issue-151 fix of chain reading atoms in read_mmcif & descriptor outpu…
4.2.2
2024-09-09 14:20:23 +02:00
Peter Schmidtke
fdd5a7d14e issue-151 fix of chain reading atoms in read_mmcif & descriptor output writing 2024-09-09 12:14:06 +00:00
Peter Schmidtke
9fdba19dd7 Merge pull request #154 from Discngine/issue-151
Bugfix of wrong atom_site parsing
2024-09-04 10:02:25 +02:00
Peter Schmidtke
4810330d32 fixes in molfile abi version 2024-07-23 15:01:04 +00:00
Peter Schmidtke
251065b939 Merge pull request #147 from pegerto/m1_modfile
compile M1/M2 chip molfile plugin
4.2.1
2024-07-23 10:24:59 +02:00
pschmidtke
c75e2d7f98 adding osx shared libraries 2024-07-23 10:00:35 +02:00
Peter Schmidtke
0e8b195945 issue-151 fix 2024-07-23 07:39:34 +00:00
Pegerto Fernandez
4f54a742c2 small readme commit 2024-06-13 10:00:23 +01:00
Pegerto Fernandez
6c5db32fdd compile M1/M2 chip molfile fork 2024-06-13 09:53:20 +01:00
Peter Schmidtke
9f2f379997 Merge pull request #144 from Discngine/ms-4.2
Bug fixes for 4.2 release
4.2
2024-04-08 12:08:48 +02:00
Peter Schmidtke
6e66d3677c Added default dockerfile 2024-04-08 09:53:46 +00:00
Peter Schmidtke
146f76e8f8 Update readme 2024-04-08 09:52:17 +00:00
Peter Schmidtke
f792bff126 fixing MSE and Se issues 2024-04-08 09:42:28 +00:00
pschmidtke
d42000c72f getting rid of hexnum writing for cif 2024-04-08 09:00:55 +02:00
Peter Schmidtke
a9eb68e8b9 Merge pull request #136 from Discngine/PeyratG-patch-1
fix coordinates writing in cif pockets
4.1.5
2024-03-20 11:07:09 +01:00
pschmidtke
16e7070daa fixing reference test 2024-03-20 10:08:35 +01:00
PeyratG
b40990afb5 fix coordinates writing in cif pockets
Issue observed while running fpocket on the PDB 7uit
2024-03-13 15:22:39 +01:00
Peter Schmidtke
2bfce34457 Merge pull request #133 from Discngine/issue-129
issue-129 correcting behaviour from pdb to mmcif
4.1.4
2024-02-23 21:33:54 +01:00
pschmidtke
6d7e84677b issue-129 correcting behaviour from pdb to mmcif 2024-02-23 21:32:54 +01:00
Peter Schmidtke
1e861b184b Merge pull request #132 from Discngine/issue-129
issue-129 adding insertion codes and splitting auth chain & residue n…
4.1.3
2024-02-16 20:46:16 +01:00
pschmidtke
4b3073e0de adding missing reference updates 2024-02-16 20:40:26 +01:00
pschmidtke
675fe8c037 issue-129 adding insertion codes and splitting auth chain & residue numbers + longer filenames are supported now 2024-02-16 20:30:08 +01:00
Peter Schmidtke
beb472ba2b Merge pull request #128 from Discngine/issue-127
fixing mmcif writing for db mode
4.1.2
2024-01-25 08:11:04 +01:00
pschmidtke
c87362fa04 fixing mmcif writing for db mode 2024-01-25 08:01:29 +01:00
Peter Schmidtke
9ff11f655f Merge pull request #126 from Discngine/fixmmcifwriting
Fixmmcifwriting
2024-01-11 14:23:47 +01:00
pschmidtke
11cff11a1e update of auth chain output for 3vi4 2024-01-11 13:58:08 +01:00
pschmidtke
a206c797a4 copying auth chain name to chain in fpocket 2024-01-11 13:52:48 +01:00
pschmidtke
79e16f8b15 sample structure with long chain names 2024-01-11 13:52:24 +01:00
Peter Schmidtke
96a6ed30ed Merge pull request #125 from Discngine/issue-107
Issue 107 adapting to long chain & residue names & molfile fixes
2024-01-11 13:35:35 +01:00
pschmidtke
5967a8fb8c Merge branch 'issue-107' of https://github.com/Discngine/fpocket into issue-107 2024-01-11 13:30:40 +01:00
pschmidtke
57989435b4 issue-107 fixing missing null check 2024-01-11 13:30:38 +01:00
Oracle Public Cloud User
9f7e173a2d issue-107 fixing segfault in linux 2024-01-11 12:29:23 +00:00
pschmidtke
6463aee064 adding back sample output 2024-01-11 12:09:53 +01:00
pschmidtke
e3347e6259 updating validation pp 2024-01-11 12:02:50 +01:00
pschmidtke
fc1dac6633 Merge remote-tracking branch 'origin' into issue-107 2024-01-11 11:59:00 +01:00
pschmidtke
73e911ab58 issue-107 updating molfile plugin for linux 64 bit 2024-01-11 11:54:22 +01:00
pschmidtke
ff92eafeb7 issue-107 updated docker file 2024-01-11 11:38:25 +01:00
pschmidtke
4f4893164f issue-107 accepting long chain & ligand names, exit code handling & ref test output. Fixes on molfile plugin for cif reading 2024-01-11 11:38:03 +01:00
Peter Schmidtke
b02ae9ac19 Merge pull request #121 from Discngine/issue-119
Issue 119
4.1.1
2023-12-15 10:22:42 +01:00
pschmidtke
87cea6b1ce issue-119 adding sample cif 2023-12-15 10:12:07 +01:00
pschmidtke
b410ea1a6a issue-119 update linux libraries 2023-12-15 10:08:20 +01:00
pschmidtke
09bb933615 issue-119 correcting molfile_plugin issue with mmcifs 2023-12-15 10:05:33 +01:00
pschmidtke
1d186a45c9 correcting comment 2023-11-23 09:12:00 +01:00
Peter Schmidtke
5614b44600 Merge pull request #118 from Discngine/issue-80
Issue 80
2023-11-23 09:08:50 +01:00
Peter Schmidtke
0a150455e0 Merge pull request #117 from Discngine/issue-105
issue-105 fixing c lib issue on some architectures
2023-11-23 08:45:39 +01:00
pschmidtke
225fd07b15 issue-80 dropping useless lines 2023-11-23 08:41:56 +01:00
pschmidtke
4295d69c33 issue-80 fixing output buffer issues & memory leak on grid generation 2023-11-22 19:15:01 +01:00
pschmidtke
e571f00051 issue-105 fixing c lib issue on some architectures 2023-11-22 18:25:57 +01:00