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4.0.2 ... peptide

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ShorkarMael
879ad730a6 data files 2020-08-13 00:54:23 -07:00
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data/all_pdb_test.txt Normal file
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data/bio_assembly/NO_BIRD/6FMP.pdb data/bio_assembly/NO_BIRD/6FMP.pdb C
data/bio_assembly/NO_BIRD/6QWN.pdb data/bio_assembly/NO_BIRD/6QWN.pdb F
data/bio_assembly/NO_BIRD/4D2D.pdb data/bio_assembly/NO_BIRD/4D2D.pdb B
data/bio_assembly/NO_BIRD/6QXP.pdb data/bio_assembly/NO_BIRD/6QXP.pdb I
data/bio_assembly/NO_BIRD/2OBH.pdb data/bio_assembly/NO_BIRD/2OBH.pdb C
data/bio_assembly/NO_BIRD/1YK1.pdb data/bio_assembly/NO_BIRD/1YK1.pdb E
data/bio_assembly/NO_BIRD/3KD7.pdb data/bio_assembly/NO_BIRD/3KD7.pdb G
data/bio_assembly/NO_BIRD/1YC5.pdb data/bio_assembly/NO_BIRD/1YC5.pdb B
data/bio_assembly/NO_BIRD/2H4F.pdb data/bio_assembly/NO_BIRD/2H4F.pdb D
data/bio_assembly/NO_BIRD/6F0Y.pdb data/bio_assembly/NO_BIRD/6F0Y.pdb B
data/bio_assembly/NO_BIRD/5OJ5.pdb data/bio_assembly/NO_BIRD/5OJ5.pdb B
data/bio_assembly/NO_BIRD/5OJR.pdb data/bio_assembly/NO_BIRD/5OJR.pdb E
data/bio_assembly/NO_BIRD/2QBX.pdb data/bio_assembly/NO_BIRD/2QBX.pdb D
data/bio_assembly/NO_BIRD/5D0J.pdb data/bio_assembly/NO_BIRD/5D0J.pdb L
data/bio_assembly/NO_BIRD/3FBR.pdb data/bio_assembly/NO_BIRD/3FBR.pdb B
data/bio_assembly/NO_BIRD/3JR3.pdb data/bio_assembly/NO_BIRD/3JR3.pdb D
data/bio_assembly/NO_BIRD/3SVM.pdb data/bio_assembly/NO_BIRD/3SVM.pdb P
data/bio_assembly/NO_BIRD/4Z5W.pdb data/bio_assembly/NO_BIRD/4Z5W.pdb P
data/bio_assembly/NO_BIRD/5E1D.pdb data/bio_assembly/NO_BIRD/5E1D.pdb D
data/bio_assembly/NO_BIRD/6Q1U.pdb data/bio_assembly/NO_BIRD/6Q1U.pdb C
data/bio_assembly/NO_BIRD/6WZZ.pdb data/bio_assembly/NO_BIRD/6WZZ.pdb B
data/bio_assembly/NO_BIRD/1A1R.pdb data/bio_assembly/NO_BIRD/1A1R.pdb C
data/bio_assembly/NO_BIRD/1EJH.pdb data/bio_assembly/NO_BIRD/1EJH.pdb E
data/bio_assembly/NO_BIRD/1BZH.pdb data/bio_assembly/NO_BIRD/1BZH.pdb I
data/bio_assembly/NO_BIRD/1AQC.pdb data/bio_assembly/NO_BIRD/1AQC.pdb C
data/bio_assembly/NO_BIRD/6TWQ.pdb data/bio_assembly/NO_BIRD/6TWQ.pdb C
data/bio_assembly/NO_BIRD/1YTJ.pdb data/bio_assembly/NO_BIRD/1YTJ.pdb I
data/bio_assembly/NO_BIRD/1YTH.pdb data/bio_assembly/NO_BIRD/1YTH.pdb I
data/bio_assembly/NO_BIRD/1YTG.pdb data/bio_assembly/NO_BIRD/1YTG.pdb I
data/bio_assembly/NO_BIRD/6CD9.pdb data/bio_assembly/NO_BIRD/6CD9.pdb B
data/bio_assembly/NO_BIRD/6C4U.pdb data/bio_assembly/NO_BIRD/6C4U.pdb G
data/bio_assembly/NO_BIRD/5H6Y.pdb data/bio_assembly/NO_BIRD/5H6Y.pdb B
data/bio_assembly/NO_BIRD/5I3L.pdb data/bio_assembly/NO_BIRD/5I3L.pdb C
data/bio_assembly/NO_BIRD/6SEO.pdb data/bio_assembly/NO_BIRD/6SEO.pdb L
data/bio_assembly/NO_BIRD/6SEN.pdb data/bio_assembly/NO_BIRD/6SEN.pdb L
data/bio_assembly/NO_BIRD/2ITK.pdb data/bio_assembly/NO_BIRD/2ITK.pdb B
data/bio_assembly/NO_BIRD/2Q5A.pdb data/bio_assembly/NO_BIRD/2Q5A.pdb B
data/bio_assembly/NO_BIRD/3UKW.pdb data/bio_assembly/NO_BIRD/3UKW.pdb C
data/bio_assembly/NO_BIRD/3UKX.pdb data/bio_assembly/NO_BIRD/3UKX.pdb C
data/bio_assembly/NO_BIRD/2VAY.pdb data/bio_assembly/NO_BIRD/2VAY.pdb B
data/bio_assembly/NO_BIRD/5UW3.pdb data/bio_assembly/NO_BIRD/5UW3.pdb E
data/bio_assembly/NO_BIRD/5U1Q.pdb data/bio_assembly/NO_BIRD/5U1Q.pdb L
data/bio_assembly/NO_BIRD/4ZRT.pdb data/bio_assembly/NO_BIRD/4ZRT.pdb B
data/bio_assembly/NO_BIRD/5EEL.pdb data/bio_assembly/NO_BIRD/5EEL.pdb L
data/bio_assembly/NO_BIRD/5W4E.pdb data/bio_assembly/NO_BIRD/5W4E.pdb A
data/bio_assembly/NO_BIRD/4NY3.pdb data/bio_assembly/NO_BIRD/4NY3.pdb C
data/bio_assembly/NO_BIRD/4AKT.pdb data/bio_assembly/NO_BIRD/4AKT.pdb C
data/bio_assembly/NO_BIRD/5XWR.pdb data/bio_assembly/NO_BIRD/5XWR.pdb C
data/bio_assembly/NO_BIRD/2H4H.pdb data/bio_assembly/NO_BIRD/2H4H.pdb B
data/bio_assembly/NO_BIRD/3AGY.pdb data/bio_assembly/NO_BIRD/3AGY.pdb C
data/bio_assembly/NO_BIRD/3AGZ.pdb data/bio_assembly/NO_BIRD/3AGZ.pdb C
data/bio_assembly/NO_BIRD/3TWS.pdb data/bio_assembly/NO_BIRD/3TWS.pdb E
data/bio_assembly/NO_BIRD/3TWT.pdb data/bio_assembly/NO_BIRD/3TWT.pdb E
data/bio_assembly/NO_BIRD/3TWV.pdb data/bio_assembly/NO_BIRD/3TWV.pdb E
data/bio_assembly/NO_BIRD/4DRW.pdb data/bio_assembly/NO_BIRD/4DRW.pdb E
data/bio_assembly/NO_BIRD/1EJ4.pdb data/bio_assembly/NO_BIRD/1EJ4.pdb B
data/bio_assembly/NO_BIRD/6TWX.pdb data/bio_assembly/NO_BIRD/6TWX.pdb C
data/bio_assembly/NO_BIRD/5K4F.pdb data/bio_assembly/NO_BIRD/5K4F.pdb C
data/bio_assembly/NO_BIRD/1XJ7.pdb data/bio_assembly/NO_BIRD/1XJ7.pdb B
data/bio_assembly/NO_BIRD/1WBP.pdb data/bio_assembly/NO_BIRD/1WBP.pdb B
data/bio_assembly/NO_BIRD/1KA6.pdb data/bio_assembly/NO_BIRD/1KA6.pdb B
data/bio_assembly/NO_BIRD/6CDG.pdb data/bio_assembly/NO_BIRD/6CDG.pdb B
data/bio_assembly/NO_BIRD/5N7F.pdb data/bio_assembly/NO_BIRD/5N7F.pdb C
data/bio_assembly/NO_BIRD/6CD8.pdb data/bio_assembly/NO_BIRD/6CD8.pdb C
data/bio_assembly/NO_BIRD/5N7D.pdb data/bio_assembly/NO_BIRD/5N7D.pdb C
data/bio_assembly/NO_BIRD/2IG0.pdb data/bio_assembly/NO_BIRD/2IG0.pdb B
data/bio_assembly/NO_BIRD/2RLY.pdb data/bio_assembly/NO_BIRD/2RLY.pdb P
data/bio_assembly/NO_BIRD/5D94.pdb data/bio_assembly/NO_BIRD/5D94.pdb B
data/bio_assembly/NO_BIRD/5IC3.pdb data/bio_assembly/NO_BIRD/5IC3.pdb C
data/bio_assembly/NO_BIRD/3HS8.pdb data/bio_assembly/NO_BIRD/3HS8.pdb P
data/bio_assembly/NO_BIRD/3HS9.pdb data/bio_assembly/NO_BIRD/3HS9.pdb P
data/bio_assembly/NO_BIRD/3EG6.pdb data/bio_assembly/NO_BIRD/3EG6.pdb C
data/bio_assembly/NO_BIRD/3L3Q.pdb data/bio_assembly/NO_BIRD/3L3Q.pdb B
data/bio_assembly/NO_BIRD/3O71.pdb data/bio_assembly/NO_BIRD/3O71.pdb B
data/bio_assembly/NO_BIRD/3RZ9.pdb data/bio_assembly/NO_BIRD/3RZ9.pdb B
data/bio_assembly/NO_BIRD/3RZ2.pdb data/bio_assembly/NO_BIRD/3RZ2.pdb C
data/bio_assembly/NO_BIRD/3RZX.pdb data/bio_assembly/NO_BIRD/3RZX.pdb B
data/bio_assembly/NO_BIRD/4HH6.pdb data/bio_assembly/NO_BIRD/4HH6.pdb Z
data/bio_assembly/NO_BIRD/4GQ6.pdb data/bio_assembly/NO_BIRD/4GQ6.pdb B
data/bio_assembly/NO_BIRD/3WA4.pdb data/bio_assembly/NO_BIRD/3WA4.pdb B
data/bio_assembly/NO_BIRD/3ZMP.pdb data/bio_assembly/NO_BIRD/3ZMP.pdb C
data/bio_assembly/NO_BIRD/3UL1.pdb data/bio_assembly/NO_BIRD/3UL1.pdb A
data/bio_assembly/NO_BIRD/5GG4.pdb data/bio_assembly/NO_BIRD/5GG4.pdb E
data/bio_assembly/NO_BIRD/5GJH.pdb data/bio_assembly/NO_BIRD/5GJH.pdb B
data/bio_assembly/NO_BIRD/4QE8.pdb data/bio_assembly/NO_BIRD/4QE8.pdb C
data/bio_assembly/NO_BIRD/4QE6.pdb data/bio_assembly/NO_BIRD/4QE6.pdb B
data/bio_assembly/NO_BIRD/5E6Q.pdb data/bio_assembly/NO_BIRD/5E6Q.pdb A
data/bio_assembly/NO_BIRD/5EOD.pdb data/bio_assembly/NO_BIRD/5EOD.pdb B
data/bio_assembly/NO_BIRD/4LP9.pdb data/bio_assembly/NO_BIRD/4LP9.pdb I
data/bio_assembly/NO_BIRD/4M91.pdb data/bio_assembly/NO_BIRD/4M91.pdb B
data/bio_assembly/NO_BIRD/4M92.pdb data/bio_assembly/NO_BIRD/4M92.pdb B
data/bio_assembly/NO_BIRD/5W4F.pdb data/bio_assembly/NO_BIRD/5W4F.pdb A
data/bio_assembly/NO_BIRD/4O56.pdb data/bio_assembly/NO_BIRD/4O56.pdb B
data/bio_assembly/NO_BIRD/4YOS.pdb data/bio_assembly/NO_BIRD/4YOS.pdb E
data/bio_assembly/NO_BIRD/4Z63.pdb data/bio_assembly/NO_BIRD/4Z63.pdb P
data/bio_assembly/NO_BIRD/2YJD.pdb data/bio_assembly/NO_BIRD/2YJD.pdb C
data/bio_assembly/NO_BIRD/4X3O.pdb data/bio_assembly/NO_BIRD/4X3O.pdb C
data/bio_assembly/NO_BIRD/4X3P.pdb data/bio_assembly/NO_BIRD/4X3P.pdb C
data/bio_assembly/NO_BIRD/2H9P.pdb data/bio_assembly/NO_BIRD/2H9P.pdb B
data/bio_assembly/NO_BIRD/2H9N.pdb data/bio_assembly/NO_BIRD/2H9N.pdb B
data/bio_assembly/NO_BIRD/1LKL.pdb data/bio_assembly/NO_BIRD/1LKL.pdb B
data/bio_assembly/NO_BIRD/1LKK.pdb data/bio_assembly/NO_BIRD/1LKK.pdb B
data/bio_assembly/NO_BIRD/3IOL.pdb data/bio_assembly/NO_BIRD/3IOL.pdb B
data/bio_assembly/NO_BIRD/5DNJ.pdb data/bio_assembly/NO_BIRD/5DNJ.pdb B
data/bio_assembly/NO_BIRD/6P5L.pdb data/bio_assembly/NO_BIRD/6P5L.pdb D
data/bio_assembly/NO_BIRD/6Y4Q.pdb data/bio_assembly/NO_BIRD/6Y4Q.pdb C
data/bio_assembly/NO_BIRD/1QKB.pdb data/bio_assembly/NO_BIRD/1QKB.pdb B
data/bio_assembly/NO_BIRD/1QKA.pdb data/bio_assembly/NO_BIRD/1QKA.pdb B
data/bio_assembly/NO_BIRD/1E6I.pdb data/bio_assembly/NO_BIRD/1E6I.pdb P
data/bio_assembly/NO_BIRD/6RJP.pdb data/bio_assembly/NO_BIRD/6RJP.pdb C
data/bio_assembly/NO_BIRD/1OHE.pdb data/bio_assembly/NO_BIRD/1OHE.pdb B
data/bio_assembly/NO_BIRD/1Q1S.pdb data/bio_assembly/NO_BIRD/1Q1S.pdb A
data/bio_assembly/NO_BIRD/1G5J.pdb data/bio_assembly/NO_BIRD/1G5J.pdb B
data/bio_assembly/NO_BIRD/1JEV.pdb data/bio_assembly/NO_BIRD/1JEV.pdb B
data/bio_assembly/NO_BIRD/1JEU.pdb data/bio_assembly/NO_BIRD/1JEU.pdb B
data/bio_assembly/NO_BIRD/1JET.pdb data/bio_assembly/NO_BIRD/1JET.pdb B
data/bio_assembly/NO_BIRD/1B32.pdb data/bio_assembly/NO_BIRD/1B32.pdb B
data/bio_assembly/NO_BIRD/1B46.pdb data/bio_assembly/NO_BIRD/1B46.pdb B
data/bio_assembly/NO_BIRD/1B9J.pdb data/bio_assembly/NO_BIRD/1B9J.pdb B
data/bio_assembly/NO_BIRD/6JXU.pdb data/bio_assembly/NO_BIRD/6JXU.pdb B
data/bio_assembly/NO_BIRD/6EJ8.pdb data/bio_assembly/NO_BIRD/6EJ8.pdb B
data/bio_assembly/NO_BIRD/6EJ9.pdb data/bio_assembly/NO_BIRD/6EJ9.pdb B
data/bio_assembly/NO_BIRD/1O6P.pdb data/bio_assembly/NO_BIRD/1O6P.pdb C
data/bio_assembly/NO_BIRD/5OK6.pdb data/bio_assembly/NO_BIRD/5OK6.pdb C
data/bio_assembly/NO_BIRD/2IV8.pdb data/bio_assembly/NO_BIRD/2IV8.pdb P
data/bio_assembly/NO_BIRD/2OY2.pdb data/bio_assembly/NO_BIRD/2OY2.pdb W
data/bio_assembly/NO_BIRD/2OXW.pdb data/bio_assembly/NO_BIRD/2OXW.pdb X
data/bio_assembly/NO_BIRD/2O5G.pdb data/bio_assembly/NO_BIRD/2O5G.pdb B
data/bio_assembly/NO_BIRD/3GLU.pdb data/bio_assembly/NO_BIRD/3GLU.pdb B
data/bio_assembly/NO_BIRD/2Y1N.pdb data/bio_assembly/NO_BIRD/2Y1N.pdb B
data/bio_assembly/NO_BIRD/3FDL.pdb data/bio_assembly/NO_BIRD/3FDL.pdb B
data/bio_assembly/NO_BIRD/3JZO.pdb data/bio_assembly/NO_BIRD/3JZO.pdb P
data/bio_assembly/NO_BIRD/3PDH.pdb data/bio_assembly/NO_BIRD/3PDH.pdb D
data/bio_assembly/NO_BIRD/3RC0.pdb data/bio_assembly/NO_BIRD/3RC0.pdb P
data/bio_assembly/NO_BIRD/4FII.pdb data/bio_assembly/NO_BIRD/4FII.pdb B
data/bio_assembly/NO_BIRD/3ZMQ.pdb data/bio_assembly/NO_BIRD/3ZMQ.pdb C
data/bio_assembly/NO_BIRD/3ZRJ.pdb data/bio_assembly/NO_BIRD/3ZRJ.pdb X
data/bio_assembly/NO_BIRD/3SRJ.pdb data/bio_assembly/NO_BIRD/3SRJ.pdb C
data/bio_assembly/NO_BIRD/5FOS.pdb data/bio_assembly/NO_BIRD/5FOS.pdb C
data/bio_assembly/NO_BIRD/5GH9.pdb data/bio_assembly/NO_BIRD/5GH9.pdb B
data/bio_assembly/NO_BIRD/5TWH.pdb data/bio_assembly/NO_BIRD/5TWH.pdb E
data/bio_assembly/NO_BIRD/5TYI.pdb data/bio_assembly/NO_BIRD/5TYI.pdb L
data/bio_assembly/NO_BIRD/5UW5.pdb data/bio_assembly/NO_BIRD/5UW5.pdb E
data/bio_assembly/NO_BIRD/5UW7.pdb data/bio_assembly/NO_BIRD/5UW7.pdb C
data/bio_assembly/NO_BIRD/5K9S.pdb data/bio_assembly/NO_BIRD/5K9S.pdb B
data/bio_assembly/NO_BIRD/5AFG.pdb data/bio_assembly/NO_BIRD/5AFG.pdb B
data/bio_assembly/NO_BIRD/4QSY.pdb data/bio_assembly/NO_BIRD/4QSY.pdb B
data/bio_assembly/NO_BIRD/5VLA.pdb data/bio_assembly/NO_BIRD/5VLA.pdb Z
data/bio_assembly/NO_BIRD/5VTB.pdb data/bio_assembly/NO_BIRD/5VTB.pdb B
data/bio_assembly/NO_BIRD/4O6W.pdb data/bio_assembly/NO_BIRD/4O6W.pdb C
data/bio_assembly/NO_BIRD/4Y6L.pdb data/bio_assembly/NO_BIRD/4Y6L.pdb C
data/bio_assembly/NO_BIRD/4Z2V.pdb data/bio_assembly/NO_BIRD/4Z2V.pdb C
data/bio_assembly/NO_BIRD/2Z3L.pdb data/bio_assembly/NO_BIRD/2Z3L.pdb C
data/bio_assembly/NO_BIRD/2Z3N.pdb data/bio_assembly/NO_BIRD/2Z3N.pdb C
data/bio_assembly/NO_BIRD/4X6S.pdb data/bio_assembly/NO_BIRD/4X6S.pdb L
data/bio_assembly/NO_BIRD/4OKF.pdb data/bio_assembly/NO_BIRD/4OKF.pdb A
data/bio_assembly/NO_BIRD/6HON.pdb data/bio_assembly/NO_BIRD/6HON.pdb B
data/bio_assembly/NO_BIRD/6HOM.pdb data/bio_assembly/NO_BIRD/6HOM.pdb B
data/bio_assembly/NO_BIRD/6HV2.pdb data/bio_assembly/NO_BIRD/6HV2.pdb B
data/bio_assembly/NO_BIRD/5X7B.pdb data/bio_assembly/NO_BIRD/5X7B.pdb L
data/bio_assembly/BIRD/2R9B.pdb data/bio_assembly/BIRD/2R9B.pdb C
data/bio_assembly/BIRD/3URI.pdb data/bio_assembly/BIRD/3URI.pdb B
data/bio_assembly/BIRD/3URL.pdb data/bio_assembly/BIRD/3URL.pdb B
data/bio_assembly/BIRD/3V3B.pdb data/bio_assembly/BIRD/3V3B.pdb D
data/bio_assembly/BIRD/3UQP.pdb data/bio_assembly/BIRD/3UQP.pdb B
data/bio_assembly/BIRD/3UQR.pdb data/bio_assembly/BIRD/3UQR.pdb D
data/bio_assembly/BIRD/5JXH.pdb data/bio_assembly/BIRD/5JXH.pdb H
data/bio_assembly/BIRD/5JXJ.pdb data/bio_assembly/BIRD/5JXJ.pdb H
data/bio_assembly/BIRD/4RCP.pdb data/bio_assembly/BIRD/4RCP.pdb B
data/bio_assembly/BIRD/4TPG.pdb data/bio_assembly/BIRD/4TPG.pdb E
data/bio_assembly/BIRD/4RYD.pdb data/bio_assembly/BIRD/4RYD.pdb H
data/bio_assembly/BIRD/4O6W.pdb data/bio_assembly/BIRD/4O6W.pdb C
data/bio_assembly/BIRD/4K1E.pdb data/bio_assembly/BIRD/4K1E.pdb B
data/bio_assembly/BIRD/4DV9.pdb data/bio_assembly/BIRD/4DV9.pdb B
data/bio_assembly/BIRD/4DVF.pdb data/bio_assembly/BIRD/4DVF.pdb C
data/bio_assembly/BIRD/4EZP.pdb data/bio_assembly/BIRD/4EZP.pdb D
data/bio_assembly/BIRD/4FBX.pdb data/bio_assembly/BIRD/4FBX.pdb B
data/bio_assembly/BIRD/4G35.pdb data/bio_assembly/BIRD/4G35.pdb B
data/bio_assembly/BIRD/5DNJ.pdb data/bio_assembly/BIRD/5DNJ.pdb B
data/bio_assembly/BIRD/4WHH.pdb data/bio_assembly/BIRD/4WHH.pdb B
data/bio_assembly/BIRD/4WHK.pdb data/bio_assembly/BIRD/4WHK.pdb B
data/bio_assembly/BIRD/4WHL.pdb data/bio_assembly/BIRD/4WHL.pdb B
data/bio_assembly/BIRD/1SFI.pdb data/bio_assembly/BIRD/1SFI.pdb I
data/bio_assembly/BIRD/3RQ7.pdb data/bio_assembly/BIRD/3RQ7.pdb B
data/bio_assembly/BIRD/3SNA.pdb data/bio_assembly/BIRD/3SNA.pdb H
data/bio_assembly/BIRD/3SNB.pdb data/bio_assembly/BIRD/3SNB.pdb H
data/bio_assembly/BIRD/3SNC.pdb data/bio_assembly/BIRD/3SNC.pdb H
data/bio_assembly/BIRD/3SND.pdb data/bio_assembly/BIRD/3SND.pdb C
data/bio_assembly/BIRD/3SNE.pdb data/bio_assembly/BIRD/3SNE.pdb H
data/bio_assembly/BIRD/3S70.pdb data/bio_assembly/BIRD/3S70.pdb B
data/bio_assembly/BIRD/1OKX.pdb data/bio_assembly/BIRD/1OKX.pdb C
data/bio_assembly/BIRD/6VXY.pdb data/bio_assembly/BIRD/6VXY.pdb C
data/bio_assembly/BIRD/3VFK.pdb data/bio_assembly/BIRD/3VFK.pdb G
data/bio_assembly/BIRD/3VFJ.pdb data/bio_assembly/BIRD/3VFJ.pdb G
data/bio_assembly/BIRD/2XAD.pdb data/bio_assembly/BIRD/2XAD.pdb E
data/bio_assembly/BIRD/4MFL.pdb data/bio_assembly/BIRD/4MFL.pdb B
data/bio_assembly/BIRD/4MFP.pdb data/bio_assembly/BIRD/4MFP.pdb B
data/bio_assembly/BIRD/4MFQ.pdb data/bio_assembly/BIRD/4MFQ.pdb B
data/bio_assembly/BIRD/4PJZ.pdb data/bio_assembly/BIRD/4PJZ.pdb B
data/bio_assembly/BIRD/4PK0.pdb data/bio_assembly/BIRD/4PK0.pdb B
data/bio_assembly/BIRD/4EEC.pdb data/bio_assembly/BIRD/4EEC.pdb C
data/bio_assembly/BIRD/4JNA.pdb data/bio_assembly/BIRD/4JNA.pdb I
data/bio_assembly/BIRD/4NEC.pdb data/bio_assembly/BIRD/4NEC.pdb E
data/bio_assembly/BIRD/3AH8.pdb data/bio_assembly/BIRD/3AH8.pdb Y
data/bio_assembly/BIRD/3RQD.pdb data/bio_assembly/BIRD/3RQD.pdb C
data/bio_assembly/BIRD/2CV3.pdb data/bio_assembly/BIRD/2CV3.pdb B
data/bio_assembly/BIRD/2RMC.pdb data/bio_assembly/BIRD/2RMC.pdb B
data/bio_assembly/BIRD/4TOT.pdb data/bio_assembly/BIRD/4TOT.pdb E
data/bio_assembly/BIRD/6O21.pdb data/bio_assembly/BIRD/6O21.pdb B
data/bio_assembly/BIRD/6C1Q.pdb data/bio_assembly/BIRD/6C1Q.pdb L
data/bio_assembly/BIRD/6C1R.pdb data/bio_assembly/BIRD/6C1R.pdb L
data/bio_assembly/BIRD/1MF8.pdb data/bio_assembly/BIRD/1MF8.pdb D
data/bio_assembly/BIRD/3WDC.pdb data/bio_assembly/BIRD/3WDC.pdb B
data/bio_assembly/BIRD/3WDD.pdb data/bio_assembly/BIRD/3WDD.pdb B
data/bio_assembly/BIRD/3WDE.pdb data/bio_assembly/BIRD/3WDE.pdb B
data/bio_assembly/BIRD/3WMG.pdb data/bio_assembly/BIRD/3WMG.pdb B
data/bio_assembly/BIRD/3WNE.pdb data/bio_assembly/BIRD/3WNE.pdb C
data/bio_assembly/BIRD/3WNF.pdb data/bio_assembly/BIRD/3WNF.pdb C
data/bio_assembly/BIRD/3WNG.pdb data/bio_assembly/BIRD/3WNG.pdb C
data/bio_assembly/BIRD/2Z6W.pdb data/bio_assembly/BIRD/2Z6W.pdb M
data/bio_assembly/BIRD/4MNW.pdb data/bio_assembly/BIRD/4MNW.pdb B
data/bio_assembly/BIRD/4MNX.pdb data/bio_assembly/BIRD/4MNX.pdb B
data/bio_assembly/BIRD/4MNY.pdb data/bio_assembly/BIRD/4MNY.pdb C
data/bio_assembly/BIRD/4OS1.pdb data/bio_assembly/BIRD/4OS1.pdb B
data/bio_assembly/BIRD/4OS2.pdb data/bio_assembly/BIRD/4OS2.pdb B
data/bio_assembly/BIRD/4OS4.pdb data/bio_assembly/BIRD/4OS4.pdb B
data/bio_assembly/BIRD/4OS5.pdb data/bio_assembly/BIRD/4OS5.pdb B
data/bio_assembly/BIRD/4OS6.pdb data/bio_assembly/BIRD/4OS6.pdb B
data/bio_assembly/BIRD/4OS7.pdb data/bio_assembly/BIRD/4OS7.pdb B
data/bio_assembly/BIRD/4IPZ.pdb data/bio_assembly/BIRD/4IPZ.pdb B
data/bio_assembly/BIRD/4JJM.pdb data/bio_assembly/BIRD/4JJM.pdb F
data/bio_assembly/BIRD/4JK5.pdb data/bio_assembly/BIRD/4JK5.pdb B
data/bio_assembly/BIRD/4JK6.pdb data/bio_assembly/BIRD/4JK6.pdb B
data/bio_assembly/BIRD/4DGC.pdb data/bio_assembly/BIRD/4DGC.pdb F
data/bio_assembly/BIRD/4GLY.pdb data/bio_assembly/BIRD/4GLY.pdb B
data/bio_assembly/BIRD/4YV9.pdb data/bio_assembly/BIRD/4YV9.pdb E
data/bio_assembly/BIRD/4ZJX.pdb data/bio_assembly/BIRD/4ZJX.pdb B
data/bio_assembly/BIRD/4ZQW.pdb data/bio_assembly/BIRD/4ZQW.pdb A
data/bio_assembly/BIRD/3BO7.pdb data/bio_assembly/BIRD/3BO7.pdb E
data/bio_assembly/BIRD/3EOV.pdb data/bio_assembly/BIRD/3EOV.pdb C
data/bio_assembly/BIRD/4GUX.pdb data/bio_assembly/BIRD/4GUX.pdb D
data/bio_assembly/BIRD/4GVU.pdb data/bio_assembly/BIRD/4GVU.pdb B
data/bio_assembly/BIRD/4HGC.pdb data/bio_assembly/BIRD/4HGC.pdb I
data/bio_assembly/BIRD/4HY7.pdb data/bio_assembly/BIRD/4HY7.pdb B
data/bio_assembly/BIRD/2WFJ.pdb data/bio_assembly/BIRD/2WFJ.pdb B
data/bio_assembly/BIRD/2X7K.pdb data/bio_assembly/BIRD/2X7K.pdb B
data/bio_assembly/BIRD/4KEL.pdb data/bio_assembly/BIRD/4KEL.pdb B
data/bio_assembly/BIRD/4L3O.pdb data/bio_assembly/BIRD/4L3O.pdb E
data/bio_assembly/BIRD/4KTU.pdb data/bio_assembly/BIRD/4KTU.pdb B
data/bio_assembly/BIRD/4KTS.pdb data/bio_assembly/BIRD/4KTS.pdb B
data/bio_assembly/BIRD/4KTC.pdb data/bio_assembly/BIRD/4KTC.pdb B
data/bio_assembly/BIRD/3AVA.pdb data/bio_assembly/BIRD/3AVA.pdb X
data/bio_assembly/BIRD/3AVB.pdb data/bio_assembly/BIRD/3AVB.pdb X
data/bio_assembly/BIRD/3AV9.pdb data/bio_assembly/BIRD/3AV9.pdb X
data/bio_assembly/BIRD/3AVI.pdb data/bio_assembly/BIRD/3AVI.pdb D
data/bio_assembly/BIRD/3AVJ.pdb data/bio_assembly/BIRD/3AVJ.pdb D
data/bio_assembly/BIRD/3AVK.pdb data/bio_assembly/BIRD/3AVK.pdb D
data/bio_assembly/BIRD/3AVL.pdb data/bio_assembly/BIRD/3AVL.pdb E
data/bio_assembly/BIRD/3AVM.pdb data/bio_assembly/BIRD/3AVM.pdb D
data/bio_assembly/BIRD/3AVN.pdb data/bio_assembly/BIRD/3AVN.pdb G
data/bio_assembly/BIRD/5XN3.pdb data/bio_assembly/BIRD/5XN3.pdb B
data/bio_assembly/BIRD/6CN8.pdb data/bio_assembly/BIRD/6CN8.pdb B
data/bio_assembly/BIRD/6DN8.pdb data/bio_assembly/BIRD/6DN8.pdb B
data/bio_assembly/BIRD/6DN5.pdb data/bio_assembly/BIRD/6DN5.pdb B
data/bio_assembly/BIRD/6DN7.pdb data/bio_assembly/BIRD/6DN7.pdb D
data/bio_assembly/BIRD/6DN6.pdb data/bio_assembly/BIRD/6DN6.pdb B
data/bio_assembly/BIRD/5VI6.pdb data/bio_assembly/BIRD/5VI6.pdb B
data/bio_assembly/BIRD/4WVT.pdb data/bio_assembly/BIRD/4WVT.pdb C
data/bio_assembly/BIRD/4WVU.pdb data/bio_assembly/BIRD/4WVU.pdb B
data/bio_assembly/BIRD/2POY.pdb data/bio_assembly/BIRD/2POY.pdb T
data/bio_assembly/BIRD/2OJU.pdb data/bio_assembly/BIRD/2OJU.pdb D
data/bio_assembly/BIRD/1BCK.pdb data/bio_assembly/BIRD/1BCK.pdb C
data/bio_assembly/BIRD/1CWC.pdb data/bio_assembly/BIRD/1CWC.pdb C
data/bio_assembly/BIRD/1CWB.pdb data/bio_assembly/BIRD/1CWB.pdb C
data/bio_assembly/BIRD/1CWA.pdb data/bio_assembly/BIRD/1CWA.pdb C
data/bio_assembly/BIRD/1CYN.pdb data/bio_assembly/BIRD/1CYN.pdb C
data/bio_assembly/BIRD/1IKF.pdb data/bio_assembly/BIRD/1IKF.pdb C
data/bio_assembly/BIRD/6J67.pdb data/bio_assembly/BIRD/6J67.pdb C
data/bio_assembly/BIRD/3PMP.pdb data/bio_assembly/BIRD/3PMP.pdb C
data/bio_assembly/BIRD/1MIK.pdb data/bio_assembly/BIRD/1MIK.pdb B
data/bio_assembly/BIRD/1QNH.pdb data/bio_assembly/BIRD/1QNH.pdb C
data/bio_assembly/BIRD/1QNG.pdb data/bio_assembly/BIRD/1QNG.pdb D
data/bio_assembly/BIRD/1TK2.pdb data/bio_assembly/BIRD/1TK2.pdb B
data/bio_assembly/BIRD/1TMB.pdb data/bio_assembly/BIRD/1TMB.pdb T
data/bio_assembly/BIRD/1W9U.pdb data/bio_assembly/BIRD/1W9U.pdb C
data/bio_assembly/BIRD/1WAW.pdb data/bio_assembly/BIRD/1WAW.pdb B
data/bio_assembly/BIRD/1XQ7.pdb data/bio_assembly/BIRD/1XQ7.pdb D
data/bio_assembly/BIRD/2BCD.pdb data/bio_assembly/BIRD/2BCD.pdb B
data/bio_assembly/BIRD/3SM1.pdb data/bio_assembly/BIRD/3SM1.pdb J
data/bio_assembly/BIRD/6DNO.pdb data/bio_assembly/BIRD/6DNO.pdb C
data/bio_assembly/BIRD/6DTN.pdb data/bio_assembly/BIRD/6DTN.pdb A
data/bio_assembly/BIRD/6M9D.pdb data/bio_assembly/BIRD/6M9D.pdb B
data/bio_assembly/BIRD/6APR.pdb data/bio_assembly/BIRD/6APR.pdb I
data/bio_assembly/BIRD/6V2D.pdb data/bio_assembly/BIRD/6V2D.pdb B
data/bio_assembly/BIRD/6V2S.pdb data/bio_assembly/BIRD/6V2S.pdb C
data/bio_assembly/BIRD/6V2R.pdb data/bio_assembly/BIRD/6V2R.pdb B
data/bio_assembly/BIRD/5U66.pdb data/bio_assembly/BIRD/5U66.pdb B
data/bio_assembly/BIRD/1M21.pdb data/bio_assembly/BIRD/1M21.pdb C
data/bio_assembly/BIRD/1LS5.pdb data/bio_assembly/BIRD/1LS5.pdb C
data/bio_assembly/BIRD/1M43.pdb data/bio_assembly/BIRD/1M43.pdb C
data/bio_assembly/BIRD/2CF9.pdb data/bio_assembly/BIRD/2CF9.pdb I
data/bio_assembly/BIRD/2CF8.pdb data/bio_assembly/BIRD/2CF8.pdb I
data/bio_assembly/BIRD/2CN0.pdb data/bio_assembly/BIRD/2CN0.pdb I
data/bio_assembly/BIRD/2F9N.pdb data/bio_assembly/BIRD/2F9N.pdb E
data/bio_assembly/BIRD/2F9P.pdb data/bio_assembly/BIRD/2F9P.pdb E
data/bio_assembly/BIRD/2FES.pdb data/bio_assembly/BIRD/2FES.pdb D
data/bio_assembly/BIRD/2FEQ.pdb data/bio_assembly/BIRD/2FEQ.pdb D
data/bio_assembly/BIRD/1APU.pdb data/bio_assembly/BIRD/1APU.pdb I
data/bio_assembly/BIRD/1AQ7.pdb data/bio_assembly/BIRD/1AQ7.pdb B
data/bio_assembly/BIRD/1O0D.pdb data/bio_assembly/BIRD/1O0D.pdb D
data/bio_assembly/BIRD/2AGI.pdb data/bio_assembly/BIRD/2AGI.pdb A
data/bio_assembly/BIRD/2ANK.pdb data/bio_assembly/BIRD/2ANK.pdb P
data/bio_assembly/BIRD/1WB0.pdb data/bio_assembly/BIRD/1WB0.pdb B
data/bio_assembly/BIRD/1W9V.pdb data/bio_assembly/BIRD/1W9V.pdb C
data/bio_assembly/BIRD/1W6I.pdb data/bio_assembly/BIRD/1W6I.pdb B
data/bio_assembly/BIRD/1QS8.pdb data/bio_assembly/BIRD/1QS8.pdb C
data/bio_assembly/BIRD/1PSO.pdb data/bio_assembly/BIRD/1PSO.pdb I
data/bio_assembly/BIRD/1POP.pdb data/bio_assembly/BIRD/1POP.pdb B
data/bio_assembly/BIRD/1OYT.pdb data/bio_assembly/BIRD/1OYT.pdb I
data/bio_assembly/BIRD/1NZQ.pdb data/bio_assembly/BIRD/1NZQ.pdb D
data/bio_assembly/BIRD/1WVM.pdb data/bio_assembly/BIRD/1WVM.pdb C
data/bio_assembly/BIRD/1XDH.pdb data/bio_assembly/BIRD/1XDH.pdb C
data/bio_assembly/BIRD/1WKR.pdb data/bio_assembly/BIRD/1WKR.pdb I
data/bio_assembly/BIRD/1BCS.pdb data/bio_assembly/BIRD/1BCS.pdb C
data/bio_assembly/BIRD/1BCR.pdb data/bio_assembly/BIRD/1BCR.pdb C
data/bio_assembly/BIRD/6OBR.pdb data/bio_assembly/BIRD/6OBR.pdb D
data/bio_assembly/BIRD/6OBQ.pdb data/bio_assembly/BIRD/6OBQ.pdb C
data/bio_assembly/BIRD/6OBU.pdb data/bio_assembly/BIRD/6OBU.pdb C
data/bio_assembly/BIRD/1H0I.pdb data/bio_assembly/BIRD/1H0I.pdb C
data/bio_assembly/BIRD/6XA4.pdb data/bio_assembly/BIRD/6XA4.pdb B
data/bio_assembly/BIRD/6YZ6.pdb data/bio_assembly/BIRD/6YZ6.pdb C
data/bio_assembly/BIRD/1FJM.pdb data/bio_assembly/BIRD/1FJM.pdb M
data/bio_assembly/BIRD/6BKJ.pdb data/bio_assembly/BIRD/6BKJ.pdb F
data/bio_assembly/BIRD/5WGQ.pdb data/bio_assembly/BIRD/5WGQ.pdb E
data/bio_assembly/BIRD/4IMQ.pdb data/bio_assembly/BIRD/4IMQ.pdb B
data/bio_assembly/BIRD/4INH.pdb data/bio_assembly/BIRD/4INH.pdb M
data/bio_assembly/BIRD/4IMZ.pdb data/bio_assembly/BIRD/4IMZ.pdb B
data/bio_assembly/BIRD/1TL9.pdb data/bio_assembly/BIRD/1TL9.pdb B
data/bio_assembly/BIRD/1SGC.pdb data/bio_assembly/BIRD/1SGC.pdb B
data/bio_assembly/BIRD/1IZE.pdb data/bio_assembly/BIRD/1IZE.pdb B
data/bio_assembly/BIRD/1JRT.pdb data/bio_assembly/BIRD/1JRT.pdb B
data/bio_assembly/BIRD/1JRS.pdb data/bio_assembly/BIRD/1JRS.pdb B
data/bio_assembly/BIRD/4Y9W.pdb data/bio_assembly/BIRD/4Y9W.pdb B
data/bio_assembly/BIRD/4NMT.pdb data/bio_assembly/BIRD/4NMT.pdb C
data/bio_assembly/BIRD/4NMS.pdb data/bio_assembly/BIRD/4NMS.pdb C
data/bio_assembly/BIRD/4NMR.pdb data/bio_assembly/BIRD/4NMR.pdb C
data/bio_assembly/BIRD/4NMQ.pdb data/bio_assembly/BIRD/4NMQ.pdb C
data/bio_assembly/BIRD/4NMP.pdb data/bio_assembly/BIRD/4NMP.pdb C
data/bio_assembly/BIRD/4NMO.pdb data/bio_assembly/BIRD/4NMO.pdb C
data/bio_assembly/BIRD/4MZJ.pdb data/bio_assembly/BIRD/4MZJ.pdb T
data/bio_assembly/BIRD/3P72.pdb data/bio_assembly/BIRD/3P72.pdb B
data/bio_assembly/BIRD/3OE0.pdb data/bio_assembly/BIRD/3OE0.pdb I
data/bio_assembly/BIRD/4I7D.pdb data/bio_assembly/BIRD/4I7D.pdb B
data/bio_assembly/BIRD/4I7C.pdb data/bio_assembly/BIRD/4I7C.pdb B
data/bio_assembly/BIRD/4I7B.pdb data/bio_assembly/BIRD/4I7B.pdb B
data/bio_assembly/BIRD/4I5N.pdb data/bio_assembly/BIRD/4I5N.pdb G
data/bio_assembly/BIRD/4I5L.pdb data/bio_assembly/BIRD/4I5L.pdb G
data/bio_assembly/BIRD/2P0R.pdb data/bio_assembly/BIRD/2P0R.pdb D
data/bio_assembly/BIRD/2NYL.pdb data/bio_assembly/BIRD/2NYL.pdb G
data/bio_assembly/BIRD/2NYM.pdb data/bio_assembly/BIRD/2NYM.pdb G
data/bio_assembly/BIRD/2NQA.pdb data/bio_assembly/BIRD/2NQA.pdb D
data/bio_assembly/BIRD/2NPP.pdb data/bio_assembly/BIRD/2NPP.pdb Y
data/bio_assembly/BIRD/2QZX.pdb data/bio_assembly/BIRD/2QZX.pdb C
data/bio_assembly/BIRD/2RMP.pdb data/bio_assembly/BIRD/2RMP.pdb B
data/bio_assembly/BIRD/2PSX.pdb data/bio_assembly/BIRD/2PSX.pdb B
data/bio_assembly/BIRD/2PSY.pdb data/bio_assembly/BIRD/2PSY.pdb B
data/bio_assembly/BIRD/4ER2.pdb data/bio_assembly/BIRD/4ER2.pdb I
data/bio_assembly/BIRD/4NMV.pdb data/bio_assembly/BIRD/4NMV.pdb C
data/bio_assembly/BIRD/4EJK.pdb data/bio_assembly/BIRD/4EJK.pdb N
data/bio_assembly/BIRD/4EJD.pdb data/bio_assembly/BIRD/4EJD.pdb C
data/bio_assembly/BIRD/4EXH.pdb data/bio_assembly/BIRD/4EXH.pdb J
data/bio_assembly/BIRD/4G5G.pdb data/bio_assembly/BIRD/4G5G.pdb I
data/bio_assembly/BIRD/4BP9.pdb data/bio_assembly/BIRD/4BP9.pdb G
data/bio_assembly/BIRD/3V4L.pdb data/bio_assembly/BIRD/3V4L.pdb B
data/bio_assembly/BIRD/3V4O.pdb data/bio_assembly/BIRD/3V4O.pdb B
data/bio_assembly/BIRD/3UOA.pdb data/bio_assembly/BIRD/3UOA.pdb L
data/bio_assembly/BIRD/3UO8.pdb data/bio_assembly/BIRD/3UO8.pdb L
data/bio_assembly/BIRD/3BPM.pdb data/bio_assembly/BIRD/3BPM.pdb D
data/bio_assembly/BIRD/5LW1.pdb data/bio_assembly/BIRD/5LW1.pdb C
data/bio_assembly/BIRD/5MS4.pdb data/bio_assembly/BIRD/5MS4.pdb E
data/bio_assembly/BIRD/5K99.pdb data/bio_assembly/BIRD/5K99.pdb C
data/bio_assembly/BIRD/5JPF.pdb data/bio_assembly/BIRD/5JPF.pdb M
data/bio_assembly/BIRD/5N7Q.pdb data/bio_assembly/BIRD/5N7Q.pdb I
data/bio_assembly/BIRD/5I70.pdb data/bio_assembly/BIRD/5I70.pdb D
data/bio_assembly/BIRD/5HVP.pdb data/bio_assembly/BIRD/5HVP.pdb C
data/bio_assembly/BIRD/5FC3.pdb data/bio_assembly/BIRD/5FC3.pdb A
data/bio_assembly/BIRD/5FC2.pdb data/bio_assembly/BIRD/5FC2.pdb A
data/bio_assembly/BIRD/5EPK.pdb data/bio_assembly/BIRD/5EPK.pdb B
data/bio_assembly/BIRD/5EPJ.pdb data/bio_assembly/BIRD/5EPJ.pdb B
data/bio_assembly/BIRD/5EQ0.pdb data/bio_assembly/BIRD/5EQ0.pdb B
data/bio_assembly/BIRD/2XE4.pdb data/bio_assembly/BIRD/2XE4.pdb B
data/bio_assembly/BIRD/2Z2P.pdb data/bio_assembly/BIRD/2Z2P.pdb C
data/bio_assembly/BIRD/3E7A.pdb data/bio_assembly/BIRD/3E7A.pdb C
data/bio_assembly/BIRD/3DW8.pdb data/bio_assembly/BIRD/3DW8.pdb G
data/bio_assembly/BIRD/3EGH.pdb data/bio_assembly/BIRD/3EGH.pdb E
data/bio_assembly/BIRD/3EMY.pdb data/bio_assembly/BIRD/3EMY.pdb B
data/bio_assembly/BIRD/3MGB.pdb data/bio_assembly/BIRD/3MGB.pdb C
data/bio_assembly/BIRD/3MG9.pdb data/bio_assembly/BIRD/3MG9.pdb B
data/bio_assembly/BIRD/3FGA.pdb data/bio_assembly/BIRD/3FGA.pdb E
data/bio_assembly/BIRD/3FNT.pdb data/bio_assembly/BIRD/3FNT.pdb I
data/bio_assembly/BIRD/3FV3.pdb data/bio_assembly/BIRD/3FV3.pdb J
data/bio_assembly/BIRD/2V3H.pdb data/bio_assembly/BIRD/2V3H.pdb I
data/bio_assembly/BIRD/2V3O.pdb data/bio_assembly/BIRD/2V3O.pdb I
data/bio_assembly/BIRD/4YV8.pdb data/bio_assembly/BIRD/4YV8.pdb B
data/bio_assembly/BIRD/3Q4K.pdb data/bio_assembly/BIRD/3Q4K.pdb C
data/bio_assembly/BIRD/3Q4L.pdb data/bio_assembly/BIRD/3Q4L.pdb C
data/bio_assembly/BIRD/4TVG.pdb data/bio_assembly/BIRD/4TVG.pdb C
data/bio_assembly/BIRD/5D13.pdb data/bio_assembly/BIRD/5D13.pdb E
data/bio_assembly/BIRD/1A2C.pdb data/bio_assembly/BIRD/1A2C.pdb I
data/bio_assembly/BIRD/2IAE.pdb data/bio_assembly/BIRD/2IAE.pdb M
data/bio_assembly/BIRD/2IE3.pdb data/bio_assembly/BIRD/2IE3.pdb I
data/bio_assembly/BIRD/2H6T.pdb data/bio_assembly/BIRD/2H6T.pdb B
data/bio_assembly/BIRD/2FO5.pdb data/bio_assembly/BIRD/2FO5.pdb E

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data/bird_test.txt Normal file
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data/bio_assembly/BIRD/2R9B.pdb data/bio_assembly/BIRD/2R9B.pdb C
data/bio_assembly/BIRD/3URI.pdb data/bio_assembly/BIRD/3URI.pdb B
data/bio_assembly/BIRD/3URL.pdb data/bio_assembly/BIRD/3URL.pdb B
data/bio_assembly/BIRD/3V3B.pdb data/bio_assembly/BIRD/3V3B.pdb D
data/bio_assembly/BIRD/3UQP.pdb data/bio_assembly/BIRD/3UQP.pdb B
data/bio_assembly/BIRD/3UQR.pdb data/bio_assembly/BIRD/3UQR.pdb D
data/bio_assembly/BIRD/5JXH.pdb data/bio_assembly/BIRD/5JXH.pdb H
data/bio_assembly/BIRD/5JXJ.pdb data/bio_assembly/BIRD/5JXJ.pdb H
data/bio_assembly/BIRD/4RCP.pdb data/bio_assembly/BIRD/4RCP.pdb B
data/bio_assembly/BIRD/4TPG.pdb data/bio_assembly/BIRD/4TPG.pdb E
data/bio_assembly/BIRD/4RYD.pdb data/bio_assembly/BIRD/4RYD.pdb H
data/bio_assembly/BIRD/4O6W.pdb data/bio_assembly/BIRD/4O6W.pdb C
data/bio_assembly/BIRD/4K1E.pdb data/bio_assembly/BIRD/4K1E.pdb B
data/bio_assembly/BIRD/4DV9.pdb data/bio_assembly/BIRD/4DV9.pdb B
data/bio_assembly/BIRD/4DVF.pdb data/bio_assembly/BIRD/4DVF.pdb C
data/bio_assembly/BIRD/4EZP.pdb data/bio_assembly/BIRD/4EZP.pdb D
data/bio_assembly/BIRD/4FBX.pdb data/bio_assembly/BIRD/4FBX.pdb B
data/bio_assembly/BIRD/4G35.pdb data/bio_assembly/BIRD/4G35.pdb B
data/bio_assembly/BIRD/5DNJ.pdb data/bio_assembly/BIRD/5DNJ.pdb B
data/bio_assembly/BIRD/4WHH.pdb data/bio_assembly/BIRD/4WHH.pdb B
data/bio_assembly/BIRD/4WHK.pdb data/bio_assembly/BIRD/4WHK.pdb B
data/bio_assembly/BIRD/4WHL.pdb data/bio_assembly/BIRD/4WHL.pdb B
data/bio_assembly/BIRD/1SFI.pdb data/bio_assembly/BIRD/1SFI.pdb I
data/bio_assembly/BIRD/3RQ7.pdb data/bio_assembly/BIRD/3RQ7.pdb B
data/bio_assembly/BIRD/3SNA.pdb data/bio_assembly/BIRD/3SNA.pdb H
data/bio_assembly/BIRD/3SNB.pdb data/bio_assembly/BIRD/3SNB.pdb H
data/bio_assembly/BIRD/3SNC.pdb data/bio_assembly/BIRD/3SNC.pdb H
data/bio_assembly/BIRD/3SND.pdb data/bio_assembly/BIRD/3SND.pdb C
data/bio_assembly/BIRD/3SNE.pdb data/bio_assembly/BIRD/3SNE.pdb H
data/bio_assembly/BIRD/3S70.pdb data/bio_assembly/BIRD/3S70.pdb B
data/bio_assembly/BIRD/1OKX.pdb data/bio_assembly/BIRD/1OKX.pdb C
data/bio_assembly/BIRD/6VXY.pdb data/bio_assembly/BIRD/6VXY.pdb C
data/bio_assembly/BIRD/3VFK.pdb data/bio_assembly/BIRD/3VFK.pdb G
data/bio_assembly/BIRD/3VFJ.pdb data/bio_assembly/BIRD/3VFJ.pdb G
data/bio_assembly/BIRD/2XAD.pdb data/bio_assembly/BIRD/2XAD.pdb E
data/bio_assembly/BIRD/4MFL.pdb data/bio_assembly/BIRD/4MFL.pdb B
data/bio_assembly/BIRD/4MFP.pdb data/bio_assembly/BIRD/4MFP.pdb B
data/bio_assembly/BIRD/4MFQ.pdb data/bio_assembly/BIRD/4MFQ.pdb B
data/bio_assembly/BIRD/4PJZ.pdb data/bio_assembly/BIRD/4PJZ.pdb B
data/bio_assembly/BIRD/4PK0.pdb data/bio_assembly/BIRD/4PK0.pdb B
data/bio_assembly/BIRD/4EEC.pdb data/bio_assembly/BIRD/4EEC.pdb C
data/bio_assembly/BIRD/4JNA.pdb data/bio_assembly/BIRD/4JNA.pdb I
data/bio_assembly/BIRD/4NEC.pdb data/bio_assembly/BIRD/4NEC.pdb E
data/bio_assembly/BIRD/3AH8.pdb data/bio_assembly/BIRD/3AH8.pdb Y
data/bio_assembly/BIRD/3RQD.pdb data/bio_assembly/BIRD/3RQD.pdb C
data/bio_assembly/BIRD/2CV3.pdb data/bio_assembly/BIRD/2CV3.pdb B
data/bio_assembly/BIRD/2RMC.pdb data/bio_assembly/BIRD/2RMC.pdb B
data/bio_assembly/BIRD/4TOT.pdb data/bio_assembly/BIRD/4TOT.pdb E
data/bio_assembly/BIRD/6O21.pdb data/bio_assembly/BIRD/6O21.pdb B
data/bio_assembly/BIRD/6C1Q.pdb data/bio_assembly/BIRD/6C1Q.pdb L
data/bio_assembly/BIRD/6C1R.pdb data/bio_assembly/BIRD/6C1R.pdb L
data/bio_assembly/BIRD/1MF8.pdb data/bio_assembly/BIRD/1MF8.pdb D
data/bio_assembly/BIRD/3WDC.pdb data/bio_assembly/BIRD/3WDC.pdb B
data/bio_assembly/BIRD/3WDD.pdb data/bio_assembly/BIRD/3WDD.pdb B
data/bio_assembly/BIRD/3WDE.pdb data/bio_assembly/BIRD/3WDE.pdb B
data/bio_assembly/BIRD/3WMG.pdb data/bio_assembly/BIRD/3WMG.pdb B
data/bio_assembly/BIRD/3WNE.pdb data/bio_assembly/BIRD/3WNE.pdb C
data/bio_assembly/BIRD/3WNF.pdb data/bio_assembly/BIRD/3WNF.pdb C
data/bio_assembly/BIRD/3WNG.pdb data/bio_assembly/BIRD/3WNG.pdb C
data/bio_assembly/BIRD/2Z6W.pdb data/bio_assembly/BIRD/2Z6W.pdb M
data/bio_assembly/BIRD/4MNW.pdb data/bio_assembly/BIRD/4MNW.pdb B
data/bio_assembly/BIRD/4MNX.pdb data/bio_assembly/BIRD/4MNX.pdb B
data/bio_assembly/BIRD/4MNY.pdb data/bio_assembly/BIRD/4MNY.pdb C
data/bio_assembly/BIRD/4OS1.pdb data/bio_assembly/BIRD/4OS1.pdb B
data/bio_assembly/BIRD/4OS2.pdb data/bio_assembly/BIRD/4OS2.pdb B
data/bio_assembly/BIRD/4OS4.pdb data/bio_assembly/BIRD/4OS4.pdb B
data/bio_assembly/BIRD/4OS5.pdb data/bio_assembly/BIRD/4OS5.pdb B
data/bio_assembly/BIRD/4OS6.pdb data/bio_assembly/BIRD/4OS6.pdb B
data/bio_assembly/BIRD/4OS7.pdb data/bio_assembly/BIRD/4OS7.pdb B
data/bio_assembly/BIRD/4IPZ.pdb data/bio_assembly/BIRD/4IPZ.pdb B
data/bio_assembly/BIRD/4JJM.pdb data/bio_assembly/BIRD/4JJM.pdb F
data/bio_assembly/BIRD/4JK5.pdb data/bio_assembly/BIRD/4JK5.pdb B
data/bio_assembly/BIRD/4JK6.pdb data/bio_assembly/BIRD/4JK6.pdb B
data/bio_assembly/BIRD/4DGC.pdb data/bio_assembly/BIRD/4DGC.pdb F
data/bio_assembly/BIRD/4GLY.pdb data/bio_assembly/BIRD/4GLY.pdb B
data/bio_assembly/BIRD/4YV9.pdb data/bio_assembly/BIRD/4YV9.pdb E
data/bio_assembly/BIRD/4ZJX.pdb data/bio_assembly/BIRD/4ZJX.pdb B
data/bio_assembly/BIRD/4ZQW.pdb data/bio_assembly/BIRD/4ZQW.pdb A
data/bio_assembly/BIRD/3BO7.pdb data/bio_assembly/BIRD/3BO7.pdb E
data/bio_assembly/BIRD/3EOV.pdb data/bio_assembly/BIRD/3EOV.pdb C
data/bio_assembly/BIRD/4GUX.pdb data/bio_assembly/BIRD/4GUX.pdb D
data/bio_assembly/BIRD/4GVU.pdb data/bio_assembly/BIRD/4GVU.pdb B
data/bio_assembly/BIRD/4HGC.pdb data/bio_assembly/BIRD/4HGC.pdb I
data/bio_assembly/BIRD/4HY7.pdb data/bio_assembly/BIRD/4HY7.pdb B
data/bio_assembly/BIRD/2WFJ.pdb data/bio_assembly/BIRD/2WFJ.pdb B
data/bio_assembly/BIRD/2X7K.pdb data/bio_assembly/BIRD/2X7K.pdb B
data/bio_assembly/BIRD/4KEL.pdb data/bio_assembly/BIRD/4KEL.pdb B
data/bio_assembly/BIRD/4L3O.pdb data/bio_assembly/BIRD/4L3O.pdb E
data/bio_assembly/BIRD/4KTU.pdb data/bio_assembly/BIRD/4KTU.pdb B
data/bio_assembly/BIRD/4KTS.pdb data/bio_assembly/BIRD/4KTS.pdb B
data/bio_assembly/BIRD/4KTC.pdb data/bio_assembly/BIRD/4KTC.pdb B
data/bio_assembly/BIRD/3AVA.pdb data/bio_assembly/BIRD/3AVA.pdb X
data/bio_assembly/BIRD/3AVB.pdb data/bio_assembly/BIRD/3AVB.pdb X
data/bio_assembly/BIRD/3AV9.pdb data/bio_assembly/BIRD/3AV9.pdb X
data/bio_assembly/BIRD/3AVI.pdb data/bio_assembly/BIRD/3AVI.pdb D
data/bio_assembly/BIRD/3AVJ.pdb data/bio_assembly/BIRD/3AVJ.pdb D
data/bio_assembly/BIRD/3AVK.pdb data/bio_assembly/BIRD/3AVK.pdb D
data/bio_assembly/BIRD/3AVL.pdb data/bio_assembly/BIRD/3AVL.pdb E
data/bio_assembly/BIRD/3AVM.pdb data/bio_assembly/BIRD/3AVM.pdb D
data/bio_assembly/BIRD/3AVN.pdb data/bio_assembly/BIRD/3AVN.pdb G
data/bio_assembly/BIRD/5XN3.pdb data/bio_assembly/BIRD/5XN3.pdb B
data/bio_assembly/BIRD/6CN8.pdb data/bio_assembly/BIRD/6CN8.pdb B
data/bio_assembly/BIRD/6DN8.pdb data/bio_assembly/BIRD/6DN8.pdb B
data/bio_assembly/BIRD/6DN5.pdb data/bio_assembly/BIRD/6DN5.pdb B
data/bio_assembly/BIRD/6DN7.pdb data/bio_assembly/BIRD/6DN7.pdb D
data/bio_assembly/BIRD/6DN6.pdb data/bio_assembly/BIRD/6DN6.pdb B
data/bio_assembly/BIRD/5VI6.pdb data/bio_assembly/BIRD/5VI6.pdb B
data/bio_assembly/BIRD/4WVT.pdb data/bio_assembly/BIRD/4WVT.pdb C
data/bio_assembly/BIRD/4WVU.pdb data/bio_assembly/BIRD/4WVU.pdb B
data/bio_assembly/BIRD/2POY.pdb data/bio_assembly/BIRD/2POY.pdb T
data/bio_assembly/BIRD/2OJU.pdb data/bio_assembly/BIRD/2OJU.pdb D
data/bio_assembly/BIRD/1BCK.pdb data/bio_assembly/BIRD/1BCK.pdb C
data/bio_assembly/BIRD/1CWC.pdb data/bio_assembly/BIRD/1CWC.pdb C
data/bio_assembly/BIRD/1CWB.pdb data/bio_assembly/BIRD/1CWB.pdb C
data/bio_assembly/BIRD/1CWA.pdb data/bio_assembly/BIRD/1CWA.pdb C
data/bio_assembly/BIRD/1CYN.pdb data/bio_assembly/BIRD/1CYN.pdb C
data/bio_assembly/BIRD/1IKF.pdb data/bio_assembly/BIRD/1IKF.pdb C
data/bio_assembly/BIRD/6J67.pdb data/bio_assembly/BIRD/6J67.pdb C
data/bio_assembly/BIRD/3PMP.pdb data/bio_assembly/BIRD/3PMP.pdb C
data/bio_assembly/BIRD/1MIK.pdb data/bio_assembly/BIRD/1MIK.pdb B
data/bio_assembly/BIRD/1QNH.pdb data/bio_assembly/BIRD/1QNH.pdb C
data/bio_assembly/BIRD/1QNG.pdb data/bio_assembly/BIRD/1QNG.pdb D
data/bio_assembly/BIRD/1TK2.pdb data/bio_assembly/BIRD/1TK2.pdb B
data/bio_assembly/BIRD/1TMB.pdb data/bio_assembly/BIRD/1TMB.pdb T
data/bio_assembly/BIRD/1W9U.pdb data/bio_assembly/BIRD/1W9U.pdb C
data/bio_assembly/BIRD/1WAW.pdb data/bio_assembly/BIRD/1WAW.pdb B
data/bio_assembly/BIRD/1XQ7.pdb data/bio_assembly/BIRD/1XQ7.pdb D
data/bio_assembly/BIRD/2BCD.pdb data/bio_assembly/BIRD/2BCD.pdb B
data/bio_assembly/BIRD/3SM1.pdb data/bio_assembly/BIRD/3SM1.pdb J
data/bio_assembly/BIRD/6DNO.pdb data/bio_assembly/BIRD/6DNO.pdb C
data/bio_assembly/BIRD/6DTN.pdb data/bio_assembly/BIRD/6DTN.pdb A
data/bio_assembly/BIRD/6M9D.pdb data/bio_assembly/BIRD/6M9D.pdb B
data/bio_assembly/BIRD/6APR.pdb data/bio_assembly/BIRD/6APR.pdb I
data/bio_assembly/BIRD/6V2D.pdb data/bio_assembly/BIRD/6V2D.pdb B
data/bio_assembly/BIRD/6V2S.pdb data/bio_assembly/BIRD/6V2S.pdb C
data/bio_assembly/BIRD/6V2R.pdb data/bio_assembly/BIRD/6V2R.pdb B
data/bio_assembly/BIRD/5U66.pdb data/bio_assembly/BIRD/5U66.pdb B
data/bio_assembly/BIRD/1M21.pdb data/bio_assembly/BIRD/1M21.pdb C
data/bio_assembly/BIRD/1LS5.pdb data/bio_assembly/BIRD/1LS5.pdb C
data/bio_assembly/BIRD/1M43.pdb data/bio_assembly/BIRD/1M43.pdb C
data/bio_assembly/BIRD/2CF9.pdb data/bio_assembly/BIRD/2CF9.pdb I
data/bio_assembly/BIRD/2CF8.pdb data/bio_assembly/BIRD/2CF8.pdb I
data/bio_assembly/BIRD/2CN0.pdb data/bio_assembly/BIRD/2CN0.pdb I
data/bio_assembly/BIRD/2F9N.pdb data/bio_assembly/BIRD/2F9N.pdb E
data/bio_assembly/BIRD/2F9P.pdb data/bio_assembly/BIRD/2F9P.pdb E
data/bio_assembly/BIRD/2FES.pdb data/bio_assembly/BIRD/2FES.pdb D
data/bio_assembly/BIRD/2FEQ.pdb data/bio_assembly/BIRD/2FEQ.pdb D
data/bio_assembly/BIRD/1APU.pdb data/bio_assembly/BIRD/1APU.pdb I
data/bio_assembly/BIRD/1AQ7.pdb data/bio_assembly/BIRD/1AQ7.pdb B
data/bio_assembly/BIRD/1O0D.pdb data/bio_assembly/BIRD/1O0D.pdb D
data/bio_assembly/BIRD/2AGI.pdb data/bio_assembly/BIRD/2AGI.pdb A
data/bio_assembly/BIRD/2ANK.pdb data/bio_assembly/BIRD/2ANK.pdb P
data/bio_assembly/BIRD/1WB0.pdb data/bio_assembly/BIRD/1WB0.pdb B
data/bio_assembly/BIRD/1W9V.pdb data/bio_assembly/BIRD/1W9V.pdb C
data/bio_assembly/BIRD/1W6I.pdb data/bio_assembly/BIRD/1W6I.pdb B
data/bio_assembly/BIRD/1QS8.pdb data/bio_assembly/BIRD/1QS8.pdb C
data/bio_assembly/BIRD/1PSO.pdb data/bio_assembly/BIRD/1PSO.pdb I
data/bio_assembly/BIRD/1POP.pdb data/bio_assembly/BIRD/1POP.pdb B
data/bio_assembly/BIRD/1OYT.pdb data/bio_assembly/BIRD/1OYT.pdb I
data/bio_assembly/BIRD/1NZQ.pdb data/bio_assembly/BIRD/1NZQ.pdb D
data/bio_assembly/BIRD/1WVM.pdb data/bio_assembly/BIRD/1WVM.pdb C
data/bio_assembly/BIRD/1XDH.pdb data/bio_assembly/BIRD/1XDH.pdb C
data/bio_assembly/BIRD/1WKR.pdb data/bio_assembly/BIRD/1WKR.pdb I
data/bio_assembly/BIRD/1BCS.pdb data/bio_assembly/BIRD/1BCS.pdb C
data/bio_assembly/BIRD/1BCR.pdb data/bio_assembly/BIRD/1BCR.pdb C
data/bio_assembly/BIRD/6OBR.pdb data/bio_assembly/BIRD/6OBR.pdb D
data/bio_assembly/BIRD/6OBQ.pdb data/bio_assembly/BIRD/6OBQ.pdb C
data/bio_assembly/BIRD/6OBU.pdb data/bio_assembly/BIRD/6OBU.pdb C
data/bio_assembly/BIRD/1H0I.pdb data/bio_assembly/BIRD/1H0I.pdb C
data/bio_assembly/BIRD/6XA4.pdb data/bio_assembly/BIRD/6XA4.pdb B
data/bio_assembly/BIRD/6YZ6.pdb data/bio_assembly/BIRD/6YZ6.pdb C
data/bio_assembly/BIRD/1FJM.pdb data/bio_assembly/BIRD/1FJM.pdb M
data/bio_assembly/BIRD/6BKJ.pdb data/bio_assembly/BIRD/6BKJ.pdb F
data/bio_assembly/BIRD/5WGQ.pdb data/bio_assembly/BIRD/5WGQ.pdb E
data/bio_assembly/BIRD/4IMQ.pdb data/bio_assembly/BIRD/4IMQ.pdb B
data/bio_assembly/BIRD/4INH.pdb data/bio_assembly/BIRD/4INH.pdb M
data/bio_assembly/BIRD/4IMZ.pdb data/bio_assembly/BIRD/4IMZ.pdb B
data/bio_assembly/BIRD/1TL9.pdb data/bio_assembly/BIRD/1TL9.pdb B
data/bio_assembly/BIRD/1SGC.pdb data/bio_assembly/BIRD/1SGC.pdb B
data/bio_assembly/BIRD/1IZE.pdb data/bio_assembly/BIRD/1IZE.pdb B
data/bio_assembly/BIRD/1JRT.pdb data/bio_assembly/BIRD/1JRT.pdb B
data/bio_assembly/BIRD/1JRS.pdb data/bio_assembly/BIRD/1JRS.pdb B
data/bio_assembly/BIRD/4Y9W.pdb data/bio_assembly/BIRD/4Y9W.pdb B
data/bio_assembly/BIRD/4NMT.pdb data/bio_assembly/BIRD/4NMT.pdb C
data/bio_assembly/BIRD/4NMS.pdb data/bio_assembly/BIRD/4NMS.pdb C
data/bio_assembly/BIRD/4NMR.pdb data/bio_assembly/BIRD/4NMR.pdb C
data/bio_assembly/BIRD/4NMQ.pdb data/bio_assembly/BIRD/4NMQ.pdb C
data/bio_assembly/BIRD/4NMP.pdb data/bio_assembly/BIRD/4NMP.pdb C
data/bio_assembly/BIRD/4NMO.pdb data/bio_assembly/BIRD/4NMO.pdb C
data/bio_assembly/BIRD/4MZJ.pdb data/bio_assembly/BIRD/4MZJ.pdb T
data/bio_assembly/BIRD/3P72.pdb data/bio_assembly/BIRD/3P72.pdb B
data/bio_assembly/BIRD/3OE0.pdb data/bio_assembly/BIRD/3OE0.pdb I
data/bio_assembly/BIRD/4I7D.pdb data/bio_assembly/BIRD/4I7D.pdb B
data/bio_assembly/BIRD/4I7C.pdb data/bio_assembly/BIRD/4I7C.pdb B
data/bio_assembly/BIRD/4I7B.pdb data/bio_assembly/BIRD/4I7B.pdb B
data/bio_assembly/BIRD/4I5N.pdb data/bio_assembly/BIRD/4I5N.pdb G
data/bio_assembly/BIRD/4I5L.pdb data/bio_assembly/BIRD/4I5L.pdb G
data/bio_assembly/BIRD/2P0R.pdb data/bio_assembly/BIRD/2P0R.pdb D
data/bio_assembly/BIRD/2NYL.pdb data/bio_assembly/BIRD/2NYL.pdb G
data/bio_assembly/BIRD/2NYM.pdb data/bio_assembly/BIRD/2NYM.pdb G
data/bio_assembly/BIRD/2NQA.pdb data/bio_assembly/BIRD/2NQA.pdb D
data/bio_assembly/BIRD/2NPP.pdb data/bio_assembly/BIRD/2NPP.pdb Y
data/bio_assembly/BIRD/2QZX.pdb data/bio_assembly/BIRD/2QZX.pdb C
data/bio_assembly/BIRD/2RMP.pdb data/bio_assembly/BIRD/2RMP.pdb B
data/bio_assembly/BIRD/2PSX.pdb data/bio_assembly/BIRD/2PSX.pdb B
data/bio_assembly/BIRD/2PSY.pdb data/bio_assembly/BIRD/2PSY.pdb B
data/bio_assembly/BIRD/4ER2.pdb data/bio_assembly/BIRD/4ER2.pdb I
data/bio_assembly/BIRD/4NMV.pdb data/bio_assembly/BIRD/4NMV.pdb C
data/bio_assembly/BIRD/4EJK.pdb data/bio_assembly/BIRD/4EJK.pdb N
data/bio_assembly/BIRD/4EJD.pdb data/bio_assembly/BIRD/4EJD.pdb C
data/bio_assembly/BIRD/4EXH.pdb data/bio_assembly/BIRD/4EXH.pdb J
data/bio_assembly/BIRD/4G5G.pdb data/bio_assembly/BIRD/4G5G.pdb I
data/bio_assembly/BIRD/4BP9.pdb data/bio_assembly/BIRD/4BP9.pdb G
data/bio_assembly/BIRD/3V4L.pdb data/bio_assembly/BIRD/3V4L.pdb B
data/bio_assembly/BIRD/3V4O.pdb data/bio_assembly/BIRD/3V4O.pdb B
data/bio_assembly/BIRD/3UOA.pdb data/bio_assembly/BIRD/3UOA.pdb L
data/bio_assembly/BIRD/3UO8.pdb data/bio_assembly/BIRD/3UO8.pdb L
data/bio_assembly/BIRD/3BPM.pdb data/bio_assembly/BIRD/3BPM.pdb D
data/bio_assembly/BIRD/5LW1.pdb data/bio_assembly/BIRD/5LW1.pdb C
data/bio_assembly/BIRD/5MS4.pdb data/bio_assembly/BIRD/5MS4.pdb E
data/bio_assembly/BIRD/5K99.pdb data/bio_assembly/BIRD/5K99.pdb C
data/bio_assembly/BIRD/5JPF.pdb data/bio_assembly/BIRD/5JPF.pdb M
data/bio_assembly/BIRD/5N7Q.pdb data/bio_assembly/BIRD/5N7Q.pdb I
data/bio_assembly/BIRD/5I70.pdb data/bio_assembly/BIRD/5I70.pdb D
data/bio_assembly/BIRD/5HVP.pdb data/bio_assembly/BIRD/5HVP.pdb C
data/bio_assembly/BIRD/5FC3.pdb data/bio_assembly/BIRD/5FC3.pdb A
data/bio_assembly/BIRD/5FC2.pdb data/bio_assembly/BIRD/5FC2.pdb A
data/bio_assembly/BIRD/5EPK.pdb data/bio_assembly/BIRD/5EPK.pdb B
data/bio_assembly/BIRD/5EPJ.pdb data/bio_assembly/BIRD/5EPJ.pdb B
data/bio_assembly/BIRD/5EQ0.pdb data/bio_assembly/BIRD/5EQ0.pdb B
data/bio_assembly/BIRD/2XE4.pdb data/bio_assembly/BIRD/2XE4.pdb B
data/bio_assembly/BIRD/2Z2P.pdb data/bio_assembly/BIRD/2Z2P.pdb C
data/bio_assembly/BIRD/3E7A.pdb data/bio_assembly/BIRD/3E7A.pdb C
data/bio_assembly/BIRD/3DW8.pdb data/bio_assembly/BIRD/3DW8.pdb G
data/bio_assembly/BIRD/3EGH.pdb data/bio_assembly/BIRD/3EGH.pdb E
data/bio_assembly/BIRD/3EMY.pdb data/bio_assembly/BIRD/3EMY.pdb B
data/bio_assembly/BIRD/3MGB.pdb data/bio_assembly/BIRD/3MGB.pdb C
data/bio_assembly/BIRD/3MG9.pdb data/bio_assembly/BIRD/3MG9.pdb B
data/bio_assembly/BIRD/3FGA.pdb data/bio_assembly/BIRD/3FGA.pdb E
data/bio_assembly/BIRD/3FNT.pdb data/bio_assembly/BIRD/3FNT.pdb I
data/bio_assembly/BIRD/3FV3.pdb data/bio_assembly/BIRD/3FV3.pdb J
data/bio_assembly/BIRD/2V3H.pdb data/bio_assembly/BIRD/2V3H.pdb I
data/bio_assembly/BIRD/2V3O.pdb data/bio_assembly/BIRD/2V3O.pdb I
data/bio_assembly/BIRD/4YV8.pdb data/bio_assembly/BIRD/4YV8.pdb B
data/bio_assembly/BIRD/3Q4K.pdb data/bio_assembly/BIRD/3Q4K.pdb C
data/bio_assembly/BIRD/3Q4L.pdb data/bio_assembly/BIRD/3Q4L.pdb C
data/bio_assembly/BIRD/4TVG.pdb data/bio_assembly/BIRD/4TVG.pdb C
data/bio_assembly/BIRD/5D13.pdb data/bio_assembly/BIRD/5D13.pdb E
data/bio_assembly/BIRD/1A2C.pdb data/bio_assembly/BIRD/1A2C.pdb I
data/bio_assembly/BIRD/2IAE.pdb data/bio_assembly/BIRD/2IAE.pdb M
data/bio_assembly/BIRD/2IE3.pdb data/bio_assembly/BIRD/2IE3.pdb I
data/bio_assembly/BIRD/2H6T.pdb data/bio_assembly/BIRD/2H6T.pdb B
data/bio_assembly/BIRD/2FO5.pdb data/bio_assembly/BIRD/2FO5.pdb E

253
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2R9B;C,D;PLM2_PLAFA;;;;
3URI;B;CARP_CRYPA;;;;
3URL;B;CARP_CRYPA;;;;
3V3B;C,D;MDM2_HUMAN;;;;
3UQP;B;BACE1_HUMAN;;;;
3UQR;D,E,F;BACE1_HUMAN;;;;
5JXH;H;FURIN_HUMAN;;;;
5JXJ;H;FURIN_HUMAN;;;;
4RCP;B;PLK1_HUMAN;;;;
4TPG;E;Q8EHE6_SHEON;;;;
4RYD;H, I, J, K, L, N;FURIN_HUMAN;;;;
4O6W;C;PLK1_HUMAN;;;;
4K1E;B;KLK4_HUMAN;;;;
4DV9;B;BACE1_HUMAN;;;;
4DVF;C,D;BACE1_HUMAN;;;;
4EZP;C,D;DNAK_ECOLI;;;;
4FBX;B;CSK21_HUMAN;;;;
4G35;B;MCL1_MOUSE;-----;;;
5DNJ;B;PLK1_MOUSE;;;;
4WHH;B;PLK1_HUMAN;;;;
4WHK;B;PLK1_HUMAN;;;;
4WHL;B;PLK1_HUMAN;;;;
1SFI;I;TRY1_BOVIN;;;;
3RQ7;B;PLK1_HUMAN;;;;
3SNA;H;R1AB_CVHSA;;;;
3SNB;H;R1A_CVHSA;;;;
3SNC;H;R1A_CVHSA;-----;;;
3SND;C,D;R1A_CVHSA;;;;
3SNE;H;R1A_CVHSA;;;;
3S70;B,D;CASP6_HUMAN;;;;
1OKX;C,D;CELA1_PIG;------------;;;
6VXY;C;TRY1_BOVIN;;;;
3VFK;G;UBC_HUMAN;;;;
3VFJ;G;MALE_ECOLI;;;;
2XAD;E,F,G,H;Q6ZZJ1_ACTTI;;;;
4MFL;B;Q6F275_MESFL;;;;
4MFP;B;A0A2Z5FPF1_9MUSC;;;;
4MFQ;B;Q70AY4_ACTTI;;;;
4PJZ;B;D9IEF7_BPT4;;;;
4PK0;B;D9IEF7_BPT4;;;;
4EEC;C;STAL_STRTO;;;;
4JNA;H,I;A4ZPY8_CHRVL;;;;
4NEC;E,F,G,H;PCSK4_MOUSE;;;;
3AH8;Y;GNAI1_RAT;;;;
3RQD;C,D;HDAC8_HUMAN;;;;
2CV3;B;CELA1_PIG;;;;
2RMC;B,D,F,H;PPIC_MOUSE;;;;
4TOT;E,F,G,H;PPIF_RAT;;;;
6O21;B;KLK4_HUMAN;;;;
6C1Q;L;C5AR1_HUMAN;;;;
6C1R;L;C5AR1_HUMAN;;;;
1MF8;D;CANB1_HUMAN;;;;
3WDC;B;CLPC1_MYCTU;;;;
3WDD;B;CLPC1_MYCTU;;;;
3WDE;B;CLPC1_MYCTU;;;;
3WMG;B;M1VAN7_CYAM1;;;;
3WNE;C,D;POL_HV1N5;;;;
3WNF;C,D;POL_HV1N5;;;;
3WNG;C,D;POL_HV1N5;;;;
2Z6W;M,N;PPIF_HUMAN;;;;
4MNW;B;UROK_HUMAN;;;;
4MNX;B;UROK_HUMAN;;;;
4MNY;C,D;UROK_HUMAN;;;;
4OS1;B;UROK_HUMAN;;;;
4OS2;B;UROK_HUMAN;;;;
4OS4;B;UROK_HUMAN;;;;
4OS5;B;UROK_HUMAN;;;;
4OS6;B;UROK_HUMAN;;;;
4OS7;B;UROK_HUMAN;;;;
4IPZ;B;PPIA_HUMAN;;;;
4JJM;E,F;D0ELH5_CITSI;;;;
4JK5;B;UROK_HUMAN;;;;
4JK6;B;UROK_HUMAN;;;;
4DGC;F,G,H,I,J;PPIA_MACMU;;;;
4GLY;B;UROK_HUMAN;;;;
4YV9;E,F,G,H;A0A0J9X288_STRDY;;;;
4ZJX;B;BXA1_CLOBH;;;;
4ZQW;A,C;CDIA4_ECO5C;;;;
3BO7;E,F,G,H;D0VWS5_TOXGO;;;;
3EOV;C,D;Q9U9R3_LEIDO;;;;
4GUX;D,E,F;TRY1_BOVIN;;;;
4GVU;D,E,F;CELA1_PIG;;;;
4HGC;I;TRY1_BOVIN;;;;
4HY7;B;Q93W25_WHEAT;;;;
2WFJ;B;PPIG_HUMAN;;;;
2X7K;B;PPIL1_HUMAN;;;;
4KEL;B;KLK4_HUMAN;;;;
4L3O;E,F,G,H;SIR2_HUMAN;;;;
4KTU;B;TRY1_BOVIN;;;;
4KTS;B;TRY1_BOVIN;;;;
4KTC;B,D;POLG_HCVJA;;;;
3AVA;X,Y;POL_HV1N5;;;;
3AVB;X,Y;POL_HV1N5;;;;
3AV9;X,Y;POL_HV1N5;;;;
3AVI;D,F;POL_HV1B1;;;;
3AVJ;D,F;POL_HV1N5;;;;
3AVK;D,F;POL_HV1N5;;;;
3AVL;E,F;POL_HV1N5;;;;
3AVM;D,F;POL_HV1N5;;;;
3AVN;G,H;POL_HV1N5;;;;
5XN3;B;NOS2_HUMAN;;;;
6CN8;B;CLPC1_MYCTU;;;;
6DN8;B,D,F;SPSB4_HUMAN;;;;
6DN5;B;SPSB2_HUMAN;;;;
6DN7;B,D;SPSB4_HUMAN;;;;
6DN6;B;SPSB2_HUMAN;;;;
5VI6;B;HDAC8_HUMAN;;;;
4WVT;C,D;XIAP_HUMAN;;;;
4WVU;B;XIAP_HUMAN;;;;
2POY;T,U,V;A3FQA7_CRYPI;;;;
2OJU;C,D;PPIL3_HUMAN;;;;
1BCK;C;PPIA_HUMAN;;;;
1CWC;C;PPIA_HUMAN;;;;
1CWB;C;PPIA_HUMAN;;;;
1CWA;C;PPIA_HUMAN;;;;
1CYN;C;PPIB_HUMAN;Enzyme;;;
1IKF;C;?;;;;
6J67;C;TERF2_HUMAN;;;;
3PMP;C,D;PMP22_HUMAN;;;;
1MIK;B;PPIA_HUMAN;;;;
1QNH;C,D;Q25756_PLAFA;;;;
1QNG;D;Q25756_PLAFA;;;;
1TK2;B;NEP4_DROME;;;;
1TMB;T;THRB_HUMAN;;;;
1W9U;C,D;CHIB1_ASPFM;;;;
1WAW;B;CHIT1_HUMAN;;;;
1XQ7;D,E,F;Q4DPB9_TRYCC;;;;
2BCD;B;PP1G_HUMAN;;;;
3SM1;J,M;Q9E7M1_9GAMR;;;;
6DNO;C;PP1A_HUMAN;;;;
6DTN;A,C;NTM1A_HUMAN;;;;
6M9D;B;PICP_PSESR;;;;
6APR;I;CARP_RHICH;;;;
6V2D;B, D, F, H, J, L;CDYL2_HUMAN;;;;
6V2S;C,D;MPP8_HUMAN;;;;
6V2R;B;CBX7_HUMAN;;;;
5U66;B;IGHG1_HUMAN;;;;
1M21;C,D;Q8RJN5_STEMA;;;;
1LS5;C,D;Q8IM16_PLAF7;;;;
1M43;C,D;PLM2_PLAFA;;;;
2CF9;I;THRB_HUMAN;;;;
2CF8;I;THRB_HUMAN;;;;
2CN0;I;THRB_HUMAN;;;;
2F9N;E, F, G, H;TRYB1_HUMAN;;;;
2F9P;E, F, G, H;TRYB1_HUMAN;;;;
2FES;D;THRB_HUMAN;;;;
2FEQ;D;THRB_HUMAN;;;;
1APU;I;PEPA1_PENJA;;;;
1AQ7;B;TRY1_BOVIN;;;;
1O0D;D;THRB_HUMAN;;;;
2AGI;A;TRY1_BOVIN;;;;
2ANK;P;THRB_HUMAN;;;;
1WB0;B;CHIT1_HUMAN;;;;
1W9V;C,D;CHIB1_ASPFU;;;;
1W6I;B,D;PLM2_PLAFA;;;;
1QS8;C,D;O60989_PLAVI;;;;
1PSO;I;PEPA4_HUMAN;;;;
1POP;B;PAPA1_CARPA;;;;
1OYT;I;HIR2B_HIRME;;;;
1NZQ;D;THRB_HUMAN;;;;
1WVM;C,D;Q65Z69_9GAMM;;;;
1XDH;C,D;PLM2_PLAFA;;;;
1WKR;I;CARP_IRPLA;;;;
1BCS;C;CBP2_WHEAT;;;;
1BCR;C;CBP2_WHEAT;;;;
6OBR;D,E;PP1A_HUMAN;;;;
6OBQ;C,D;PP1A_HUMAN;;;;
6OBU;C,D;PP1A_HUMAN;;;;
1H0I;C,D;CHIB_SERMA;;;;
6XA4;B;R1AB_SARS2;;;;
6YZ6;C;R1AB_SARS2;;;;
1FJM;M,N;PP1A_RABIT;;;;
6BKJ;F, G, H, I;CAN3_HUMAN;;;;
5WGQ;E,F;ESR1_HUMAN;;;;
4IMQ;B;POLG_NVN68;;;;
4INH;J, M, N, O, P, Q, S, T;POLG_NVN68;;;;
4IMZ;B;POLG_NVN68;;;;
1TL9;B;CAN1_RAT;;;;
1SGC;B;PRTA_STRGR;;;;
1IZE;B;PEPA_ASPOZ;;;;
1JRT;B;TRY1_BOVIN;;;;
1JRS;B;TRY1_BOVIN;;;;
4Y9W;B;G8B6Y8_CANPC;;;;
4NMT;C,D;GOPC_HUMAN;;;;
4NMS;C,D;GOPC_HUMAN;;;;
4NMR;C,D;GOPC_HUMAN;;;;
4NMQ;C,D;GOPC_HUMAN;;;;
4NMP;C,D;GOPC_HUMAN;;;;
4NMO;C,D;GOPC_HUMAN;;;;
4MZJ;T;Q8I4W8_PLAF7;;;;
3P72;B;GP1BA_HUMAN;;;;
3OE0;I;CXCR4_HUMAN;;;;
4I7D;B,D;SIAH1_HUMAN;;;;
4I7C;B,D;SIAH1_HUMAN;;;;
4I7B;B,D;SIAH1_HUMAN;;;;
4I5N;G,H;2AAA_HUMAN;;;;
4I5L;G,H;PP2AA_HUMAN;;;;
2P0R;D,E;CAN9_HUMAN;;;;
2NYL;G,H;2A5G_HUMAN;;;;
2NYM;G,H;2A5G_HUMAN;;;;
2NQA;D,E;CAN8_HUMAN;;;;
2NPP;X,Y;PP2AA_HUMAN;;;;
2QZX;C,D;CARP5_CANAL;;;;
2RMP;B;CARP_RHIMI;;;;
2PSX;B;KLK5_HUMAN;;;;
2PSY;B;KLK5_HUMAN;;;;
4ER2;I;CARP_CRYPA;;;;
4NMV;C,D;GOPC_HUMAN;;;;
4EJK;N;POL_HV1Z2;;;;
4EJD;C;POL_HV1Z2;;;;
4EXH;J, M, P;Q9E7M1_9GAMR;;;;
4G5G;I;EFTU1_ECOLI;;;;
4BP9;G, H, I, J, K, L;O76728_TRYBB;;;;
3V4L;B;MALT1_MOUSE;;;;
3V4O;B;MALT1_HUMAN;;;;
3UOA;L, M;MALT1_HUMAN;;;;
3UO8;L, M;MALT1_HUMAN;;;;
3BPM;C,D;Q9NAW4_PLAFA;;;;
5LW1;C, F, I;MK08_HUMAN;;;;
5MS4;E, F, G, H;KLK8_HUMAN;;;;
5K99;C, D;A0A0F7RFM6_BACAN;;;;
5JPF;M,N;C4YM68_CANAW;;;;
5N7Q;I,J;V5HCK7_IXORI;;;;
5I70;C,D;W7FF86_PLAF8;;;;
5HVP;C;POL_HV1N5;;;;
5FC3;A;G0SHM3_CHATD;;;;
5FC2;A;G0SHM3_CHATD;;;;
5EPK;B;CBX2_HUMAN;;;;
5EPJ;B;CBX7_HUMAN;;;;
5EQ0;B;CBX8_HUMAN;;;;
2XE4;B;Q4QHU7_LEIMA;;;;
2Z2P;C,D;VGB_STAAU;;;;
3E7A;C,D;PP1A_HUMAN;;;;
3DW8;G,H;PP2AA_HUMAN;;;;
3EGH;E, F;NEB2_RAT;;;;
3EMY;B;Q2WBH2_HYPJE;;;;
3MGB;C,D;B7T1D7_9BACT;;;;
3MG9;B, C;B7T1D7_9BACT;;;;
3FGA;E;PP2AA_HUMAN;;;;
3FNT;I;Q8IM15_PLAF7;;;;
3FV3;I, J, K, L, M, N, O, P;CARP1_CANPA;;;;
2V3H;I;THRB_HUMAN;;;;
2V3O;I;THRB_HUMAN;;;;
4YV8;B;CATK_HUMAN;;;;
3Q4K;C,D;DPO3B_ECOLI;;;;
3Q4L;C,D;DPO3B_ECOLI;;;;
4TVG;C;Q90EA1_9HIV1;;;;
5D13;E, F, G, H;DLG4_RAT;;;;
1A2C;I;THRB_HUMAN;;;;
2IAE;M,N;PP2AA_HUMAN;;;;
2IE3;I;PP2AA_HUMAN;;;;
2H6T;B;CARP3_CANAL;;;;
2FO5;E, F, G, H;CYSP2_HORVU;;;;
1 2R9B C,D PLM2_PLAFA
2 3URI B CARP_CRYPA
3 3URL B CARP_CRYPA
4 3V3B C,D MDM2_HUMAN
5 3UQP B BACE1_HUMAN
6 3UQR D,E,F BACE1_HUMAN
7 5JXH H FURIN_HUMAN
8 5JXJ H FURIN_HUMAN
9 4RCP B PLK1_HUMAN
10 4TPG E Q8EHE6_SHEON
11 4RYD H, I, J, K, L, N FURIN_HUMAN
12 4O6W C PLK1_HUMAN
13 4K1E B KLK4_HUMAN
14 4DV9 B BACE1_HUMAN
15 4DVF C,D BACE1_HUMAN
16 4EZP C,D DNAK_ECOLI
17 4FBX B CSK21_HUMAN
18 4G35 B MCL1_MOUSE -----
19 5DNJ B PLK1_MOUSE
20 4WHH B PLK1_HUMAN
21 4WHK B PLK1_HUMAN
22 4WHL B PLK1_HUMAN
23 1SFI I TRY1_BOVIN
24 3RQ7 B PLK1_HUMAN
25 3SNA H R1AB_CVHSA
26 3SNB H R1A_CVHSA
27 3SNC H R1A_CVHSA -----
28 3SND C,D R1A_CVHSA
29 3SNE H R1A_CVHSA
30 3S70 B,D CASP6_HUMAN
31 1OKX C,D CELA1_PIG ------------
32 6VXY C TRY1_BOVIN
33 3VFK G UBC_HUMAN
34 3VFJ G MALE_ECOLI
35 2XAD E,F,G,H Q6ZZJ1_ACTTI
36 4MFL B Q6F275_MESFL
37 4MFP B A0A2Z5FPF1_9MUSC
38 4MFQ B Q70AY4_ACTTI
39 4PJZ B D9IEF7_BPT4
40 4PK0 B D9IEF7_BPT4
41 4EEC C STAL_STRTO
42 4JNA H,I A4ZPY8_CHRVL
43 4NEC E,F,G,H PCSK4_MOUSE
44 3AH8 Y GNAI1_RAT
45 3RQD C,D HDAC8_HUMAN
46 2CV3 B CELA1_PIG
47 2RMC B,D,F,H PPIC_MOUSE
48 4TOT E,F,G,H PPIF_RAT
49 6O21 B KLK4_HUMAN
50 6C1Q L C5AR1_HUMAN
51 6C1R L C5AR1_HUMAN
52 1MF8 D CANB1_HUMAN
53 3WDC B CLPC1_MYCTU
54 3WDD B CLPC1_MYCTU
55 3WDE B CLPC1_MYCTU
56 3WMG B M1VAN7_CYAM1
57 3WNE C,D POL_HV1N5
58 3WNF C,D POL_HV1N5
59 3WNG C,D POL_HV1N5
60 2Z6W M,N PPIF_HUMAN
61 4MNW B UROK_HUMAN
62 4MNX B UROK_HUMAN
63 4MNY C,D UROK_HUMAN
64 4OS1 B UROK_HUMAN
65 4OS2 B UROK_HUMAN
66 4OS4 B UROK_HUMAN
67 4OS5 B UROK_HUMAN
68 4OS6 B UROK_HUMAN
69 4OS7 B UROK_HUMAN
70 4IPZ B PPIA_HUMAN
71 4JJM E,F D0ELH5_CITSI
72 4JK5 B UROK_HUMAN
73 4JK6 B UROK_HUMAN
74 4DGC F,G,H,I,J PPIA_MACMU
75 4GLY B UROK_HUMAN
76 4YV9 E,F,G,H A0A0J9X288_STRDY
77 4ZJX B BXA1_CLOBH
78 4ZQW A,C CDIA4_ECO5C
79 3BO7 E,F,G,H D0VWS5_TOXGO
80 3EOV C,D Q9U9R3_LEIDO
81 4GUX D,E,F TRY1_BOVIN
82 4GVU D,E,F CELA1_PIG
83 4HGC I TRY1_BOVIN
84 4HY7 B Q93W25_WHEAT
85 2WFJ B PPIG_HUMAN
86 2X7K B PPIL1_HUMAN
87 4KEL B KLK4_HUMAN
88 4L3O E,F,G,H SIR2_HUMAN
89 4KTU B TRY1_BOVIN
90 4KTS B TRY1_BOVIN
91 4KTC B,D POLG_HCVJA
92 3AVA X,Y POL_HV1N5
93 3AVB X,Y POL_HV1N5
94 3AV9 X,Y POL_HV1N5
95 3AVI D,F POL_HV1B1
96 3AVJ D,F POL_HV1N5
97 3AVK D,F POL_HV1N5
98 3AVL E,F POL_HV1N5
99 3AVM D,F POL_HV1N5
100 3AVN G,H POL_HV1N5
101 5XN3 B NOS2_HUMAN
102 6CN8 B CLPC1_MYCTU
103 6DN8 B,D,F SPSB4_HUMAN
104 6DN5 B SPSB2_HUMAN
105 6DN7 B,D SPSB4_HUMAN
106 6DN6 B SPSB2_HUMAN
107 5VI6 B HDAC8_HUMAN
108 4WVT C,D XIAP_HUMAN
109 4WVU B XIAP_HUMAN
110 2POY T,U,V A3FQA7_CRYPI
111 2OJU C,D PPIL3_HUMAN
112 1BCK C PPIA_HUMAN
113 1CWC C PPIA_HUMAN
114 1CWB C PPIA_HUMAN
115 1CWA C PPIA_HUMAN
116 1CYN C PPIB_HUMAN Enzyme
117 1IKF C ?
118 6J67 C TERF2_HUMAN
119 3PMP C,D PMP22_HUMAN
120 1MIK B PPIA_HUMAN
121 1QNH C,D Q25756_PLAFA
122 1QNG D Q25756_PLAFA
123 1TK2 B NEP4_DROME
124 1TMB T THRB_HUMAN
125 1W9U C,D CHIB1_ASPFM
126 1WAW B CHIT1_HUMAN
127 1XQ7 D,E,F Q4DPB9_TRYCC
128 2BCD B PP1G_HUMAN
129 3SM1 J,M Q9E7M1_9GAMR
130 6DNO C PP1A_HUMAN
131 6DTN A,C NTM1A_HUMAN
132 6M9D B PICP_PSESR
133 6APR I CARP_RHICH
134 6V2D B, D, F, H, J, L CDYL2_HUMAN
135 6V2S C,D MPP8_HUMAN
136 6V2R B CBX7_HUMAN
137 5U66 B IGHG1_HUMAN
138 1M21 C,D Q8RJN5_STEMA
139 1LS5 C,D Q8IM16_PLAF7
140 1M43 C,D PLM2_PLAFA
141 2CF9 I THRB_HUMAN
142 2CF8 I THRB_HUMAN
143 2CN0 I THRB_HUMAN
144 2F9N E, F, G, H TRYB1_HUMAN
145 2F9P E, F, G, H TRYB1_HUMAN
146 2FES D THRB_HUMAN
147 2FEQ D THRB_HUMAN
148 1APU I PEPA1_PENJA
149 1AQ7 B TRY1_BOVIN
150 1O0D D THRB_HUMAN
151 2AGI A TRY1_BOVIN
152 2ANK P THRB_HUMAN
153 1WB0 B CHIT1_HUMAN
154 1W9V C,D CHIB1_ASPFU
155 1W6I B,D PLM2_PLAFA
156 1QS8 C,D O60989_PLAVI
157 1PSO I PEPA4_HUMAN
158 1POP B PAPA1_CARPA
159 1OYT I HIR2B_HIRME
160 1NZQ D THRB_HUMAN
161 1WVM C,D Q65Z69_9GAMM
162 1XDH C,D PLM2_PLAFA
163 1WKR I CARP_IRPLA
164 1BCS C CBP2_WHEAT
165 1BCR C CBP2_WHEAT
166 6OBR D,E PP1A_HUMAN
167 6OBQ C,D PP1A_HUMAN
168 6OBU C,D PP1A_HUMAN
169 1H0I C,D CHIB_SERMA
170 6XA4 B R1AB_SARS2
171 6YZ6 C R1AB_SARS2
172 1FJM M,N PP1A_RABIT
173 6BKJ F, G, H, I CAN3_HUMAN
174 5WGQ E,F ESR1_HUMAN
175 4IMQ B POLG_NVN68
176 4INH J, M, N, O, P, Q, S, T POLG_NVN68
177 4IMZ B POLG_NVN68
178 1TL9 B CAN1_RAT
179 1SGC B PRTA_STRGR
180 1IZE B PEPA_ASPOZ
181 1JRT B TRY1_BOVIN
182 1JRS B TRY1_BOVIN
183 4Y9W B G8B6Y8_CANPC
184 4NMT C,D GOPC_HUMAN
185 4NMS C,D GOPC_HUMAN
186 4NMR C,D GOPC_HUMAN
187 4NMQ C,D GOPC_HUMAN
188 4NMP C,D GOPC_HUMAN
189 4NMO C,D GOPC_HUMAN
190 4MZJ T Q8I4W8_PLAF7
191 3P72 B GP1BA_HUMAN
192 3OE0 I CXCR4_HUMAN
193 4I7D B,D SIAH1_HUMAN
194 4I7C B,D SIAH1_HUMAN
195 4I7B B,D SIAH1_HUMAN
196 4I5N G,H 2AAA_HUMAN
197 4I5L G,H PP2AA_HUMAN
198 2P0R D,E CAN9_HUMAN
199 2NYL G,H 2A5G_HUMAN
200 2NYM G,H 2A5G_HUMAN
201 2NQA D,E CAN8_HUMAN
202 2NPP X,Y PP2AA_HUMAN
203 2QZX C,D CARP5_CANAL
204 2RMP B CARP_RHIMI
205 2PSX B KLK5_HUMAN
206 2PSY B KLK5_HUMAN
207 4ER2 I CARP_CRYPA
208 4NMV C,D GOPC_HUMAN
209 4EJK N POL_HV1Z2
210 4EJD C POL_HV1Z2
211 4EXH J, M, P Q9E7M1_9GAMR
212 4G5G I EFTU1_ECOLI
213 4BP9 G, H, I, J, K, L O76728_TRYBB
214 3V4L B MALT1_MOUSE
215 3V4O B MALT1_HUMAN
216 3UOA L, M MALT1_HUMAN
217 3UO8 L, M MALT1_HUMAN
218 3BPM C,D Q9NAW4_PLAFA
219 5LW1 C, F, I MK08_HUMAN
220 5MS4 E, F, G, H KLK8_HUMAN
221 5K99 C, D A0A0F7RFM6_BACAN
222 5JPF M,N C4YM68_CANAW
223 5N7Q I,J V5HCK7_IXORI
224 5I70 C,D W7FF86_PLAF8
225 5HVP C POL_HV1N5
226 5FC3 A G0SHM3_CHATD
227 5FC2 A G0SHM3_CHATD
228 5EPK B CBX2_HUMAN
229 5EPJ B CBX7_HUMAN
230 5EQ0 B CBX8_HUMAN
231 2XE4 B Q4QHU7_LEIMA
232 2Z2P C,D VGB_STAAU
233 3E7A C,D PP1A_HUMAN
234 3DW8 G,H PP2AA_HUMAN
235 3EGH E, F NEB2_RAT
236 3EMY B Q2WBH2_HYPJE
237 3MGB C,D B7T1D7_9BACT
238 3MG9 B, C B7T1D7_9BACT
239 3FGA E PP2AA_HUMAN
240 3FNT I Q8IM15_PLAF7
241 3FV3 I, J, K, L, M, N, O, P CARP1_CANPA
242 2V3H I THRB_HUMAN
243 2V3O I THRB_HUMAN
244 4YV8 B CATK_HUMAN
245 3Q4K C,D DPO3B_ECOLI
246 3Q4L C,D DPO3B_ECOLI
247 4TVG C Q90EA1_9HIV1
248 5D13 E, F, G, H DLG4_RAT
249 1A2C I THRB_HUMAN
250 2IAE M,N PP2AA_HUMAN
251 2IE3 I PP2AA_HUMAN
252 2H6T B CARP3_CANAL
253 2FO5 E, F, G, H CYSP2_HORVU

160
data/non_BIRD.csv Normal file
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6FMP;C;KEAP1_HUMAN
6QWN;F, G, H, I, J;PLRX1_ARATH
4D2D;B;Q5M4H8_STRT2
6QXP;I, J, K, L, M, N, O, P;LRX2_ARATH
2OBH;C,D;CETN2_HUMAN
1YK1;E;ANPRC_HUMAN
3KD7;G, H, I, J, K;
1YC5;B;NPD_THEMA
2H4F;D;NPD_THEMA
6F0Y;B;ASF1_YEAST
5OJ5;B;YC48L_THEEB
5OJR;E, F;YC48L_THEEB
2QBX;D, P;EPHB2_HUMAN
5D0J;L, M;GRB7_HUMAN
3FBR;B;
3JR3;D;NPD_THEMA
3SVM;P;MPP8_HUMAN
4Z5W;P, Q;PSKR1_DAUCA
5E1D;D, E;NTM1A_HUMAN
6Q1U;C,D;PLMN_HUMAN
6WZZ;B;GID4_HUMAN
1A1R;C,D;POLG_HCVH
1EJH;E, F, G, H;IF4E_MOUSE
1BZH;I, J, K, L, M, N, O, P;PTN1_HUMAN
1AQC;C,D;APBA1_HUMAN
6TWQ;C,D;ANXA2_HUMAN
1YTJ;I;POL_SIVM1
1YTH;I;POL_HV1A2
1YTG;I;POL_HV1A2
6CD9;B;GID4_HUMAN
6C4U;G, H, I, J, K, L;RAD53_YEAST
5H6Y;B;BPTF_HUMAN
5I3L;C;DPF3_HUMAN
6SEO;L;TEAD4_HUMAN
6SEN;L, M;TEAD4_HUMAN
2ITK;B;PIN1_HUMAN
2Q5A;B;PIN1_HUMAN
3UKW;C;IMA1_MOUSE
3UKX;C;IMA1_MOUSE
2VAY;B;CALM1_HUMAN
5UW3;E, F, G, H;R4P353_9CARY
5U1Q;L, M, N, P;GRB7_HUMAN
4ZRT;B;PTN1_HUMAN
5EEL;L, M, N, P, Q, R;GRB7_HUMAN
5W4E;A, D;A0A2R2JFW7_9BASI
4NY3;C,D;PTPA_HUMAN
4AKT;C;Q52QJ1_PRODI
5XWR;C,D;RBBP4_HUMAN
2H4H;B;NPD_THEMA
3AGY;C, D, F;DNJB1_HUMAN
3AGZ;C, D, E, F;DNJB1_HUMAN
3TWS;E, F, G, H;TNKS2_HUMAN
3TWT;E, F, G, H;TNKS2_HUMAN
3TWV;E, F, G, H;TNKS2_HUMAN
4DRW;E, F;S10AA_HUMAN
1EJ4;B;IF4E_MOUSE
6TWX;C, D;MAGI1_HUMAN
5K4F;C, D;GOPC_HUMAN
1XJ7;B;ANDR_HUMAN
1WBP;B;SRPK1_HUMAN
1KA6;B;SH21A_HUMAN
6CDG;B;GID4_HUMAN
5N7F;C;MAGI1_HUMAN
6CD8;C,D;GID4_HUMAN
5N7D;C;MAGI1_HUMAN
2IG0;B;TP53B_HUMAN
2RLY;P;TCRG1_MOUSE
5D94;B;MLP3B_HUMAN
5IC3;C,D;GOPC_HUMAN
3HS8;P;AP2A2_MOUSE
3HS9;P;AP2B1_RAT
3EG6;C;WDR5_HUMAN
3L3Q;B, C;IMA1_MOUSE
3O71;B;MK01_RAT
3RZ9;B;IMA1_MOUSE
3RZ2;C,D;TP4A1_RAT
3RZX;B;IMA1_MOUSE
4HH6;Z;D3GUW1_ECO44
4GQ6;B;MEN1_HUMAN
3WA4;B;GRB2_HUMAN
3ZMP;C,D;PTN1_HUMAN
3UL1;A;IMA1_MOUSE
5GG4;E, F, G, H;UBP7_HUMAN
5GJH;B, D;GRAP2_HUMAN
4QE8;C, D;NR1H4_HUMAN
4QE6;B;NR1H4_HUMAN
5E6Q;A;IMA1_MOUSE
5EOD;B;FA11_HUMAN
4LP9;I;CARP_CRYPA
4M91;B;TUSC3_HUMAN
4M92;B;TUSC3_HUMAN
5W4F;A, D;IMA1_MOUSE
4O56;B;PLK1_HUMAN
4YOS;E;RBL1_HUMAN
4Z63;P;PSKR1_ARATH
2YJD;C, D;ESR2_HUMAN
4X3O;C;SIR2_HUMAN
4X3P;C;SIR2_HUMAN
2H9P;B;WDR5_HUMAN
2H9N;B,D;WDR5_HUMAN
1LKL;B;LCK_HUMAN
1LKK;B;LCK_HUMAN
3IOL;B;GLP1R_HUMAN
5DNJ;B;PLK1_MOUSE
6P5L;D;UBP7_HUMAN
6Y4Q;C, D;MDM2_HUMAN
1QKB;B;OPPA_SALTY
1QKA;B;OPPA_SALTY
1E6I;P;GCN5_YEAST
6RJP;C,D;B2LA1_HUMAN
1OHE;B;CC14B_HUMAN
1Q1S;A,B;LT_SV40
1G5J;B;B2CL1_HUMAN
1JEV;B;OPPA_SALTY
1JEU;B;OPPA_SALTY
1JET;B;OPPA_SALTY
1B32;B;OPPA_SALTY
1B46;B;OPPA_SALTY
1B9J;B;OPPA_SALTY
6JXU;B;SUMO1_HUMAN
6EJ8;B;XYLT1_HUMAN
6EJ9;B;XYLT1_HUMAN
1O6P;C, D, E, F;IMB1_HUMAN
5OK6;C, D;UBP11_HUMAN
2IV8;P, Q;AP2B1_HUMAN
2OY2;W,Y;MMP8_HUMAN
2OXW;X;MMP12_HUMAN
2O5G;B;CALM_CHICK
3GLU;B;SIR3_HUMAN
2Y1N;B, D;CBL_HUMAN
3FDL;B;B2CL1_HUMAN
3JZO;P;MDM4_HUMAN
3PDH;D;NPD_THEMA
3RC0;P, Q;SETD6_HUMAN
4FII;B;PAK4_HUMAN
3ZMQ;C;PTN1_HUMAN
3ZRJ;X,Y;
3SRJ;C, D, E, F;Q7KQK5_PLAF7
5FOS;C;RADA_PYRFU
5GH9;B;CBP_HUMAN
5TWH;E;MOB1A_HUMAN
5TYI;L, M, N, P;GRB7_HUMAN
5UW5;E, F, G, H;R4P353_9CARY
5UW7;C, D;R4P353_9CARY
5K9S;B, C;IMA1_MOUSE
5AFG;B;MDM2_HUMAN
4QSY;B;PTN11_HUMAN
5VLA;Z;PCSK9_HUMAN
5VTB;B;RBBP4_HUMAN
4O6W;C;PLK1_HUMAN
4Y6L;C, D;SIR2_HUMAN
4Z2V;C, P;HOAVI_HOEPD
2Z3L;C, D;LFTR_ECOLI
2Z3N;C, D;LFTR_ECOLI
4X6S;L, M;GRB7_HUMAN
4OKF;A;RNAS1_BOVIN
6HON;B, D;CNOT9_HUMAN
6HOM;B, D;CNOT9_HUMAN
6HV2;B;MMP13_HUMAN
5X7B;L, N;PTN11_HUMAN
1 6FMP C KEAP1_HUMAN
2 6QWN F, G, H, I, J PLRX1_ARATH
3 4D2D B Q5M4H8_STRT2
4 6QXP I, J, K, L, M, N, O, P LRX2_ARATH
5 2OBH C,D CETN2_HUMAN
6 1YK1 E ANPRC_HUMAN
7 3KD7 G, H, I, J, K
8 1YC5 B NPD_THEMA
9 2H4F D NPD_THEMA
10 6F0Y B ASF1_YEAST
11 5OJ5 B YC48L_THEEB
12 5OJR E, F YC48L_THEEB
13 2QBX D, P EPHB2_HUMAN
14 5D0J L, M GRB7_HUMAN
15 3FBR B
16 3JR3 D NPD_THEMA
17 3SVM P MPP8_HUMAN
18 4Z5W P, Q PSKR1_DAUCA
19 5E1D D, E NTM1A_HUMAN
20 6Q1U C,D PLMN_HUMAN
21 6WZZ B GID4_HUMAN
22 1A1R C,D POLG_HCVH
23 1EJH E, F, G, H IF4E_MOUSE
24 1BZH I, J, K, L, M, N, O, P PTN1_HUMAN
25 1AQC C,D APBA1_HUMAN
26 6TWQ C,D ANXA2_HUMAN
27 1YTJ I POL_SIVM1
28 1YTH I POL_HV1A2
29 1YTG I POL_HV1A2
30 6CD9 B GID4_HUMAN
31 6C4U G, H, I, J, K, L RAD53_YEAST
32 5H6Y B BPTF_HUMAN
33 5I3L C DPF3_HUMAN
34 6SEO L TEAD4_HUMAN
35 6SEN L, M TEAD4_HUMAN
36 2ITK B PIN1_HUMAN
37 2Q5A B PIN1_HUMAN
38 3UKW C IMA1_MOUSE
39 3UKX C IMA1_MOUSE
40 2VAY B CALM1_HUMAN
41 5UW3 E, F, G, H R4P353_9CARY
42 5U1Q L, M, N, P GRB7_HUMAN
43 4ZRT B PTN1_HUMAN
44 5EEL L, M, N, P, Q, R GRB7_HUMAN
45 5W4E A, D A0A2R2JFW7_9BASI
46 4NY3 C,D PTPA_HUMAN
47 4AKT C Q52QJ1_PRODI
48 5XWR C,D RBBP4_HUMAN
49 2H4H B NPD_THEMA
50 3AGY C, D, F DNJB1_HUMAN
51 3AGZ C, D, E, F DNJB1_HUMAN
52 3TWS E, F, G, H TNKS2_HUMAN
53 3TWT E, F, G, H TNKS2_HUMAN
54 3TWV E, F, G, H TNKS2_HUMAN
55 4DRW E, F S10AA_HUMAN
56 1EJ4 B IF4E_MOUSE
57 6TWX C, D MAGI1_HUMAN
58 5K4F C, D GOPC_HUMAN
59 1XJ7 B ANDR_HUMAN
60 1WBP B SRPK1_HUMAN
61 1KA6 B SH21A_HUMAN
62 6CDG B GID4_HUMAN
63 5N7F C MAGI1_HUMAN
64 6CD8 C,D GID4_HUMAN
65 5N7D C MAGI1_HUMAN
66 2IG0 B TP53B_HUMAN
67 2RLY P TCRG1_MOUSE
68 5D94 B MLP3B_HUMAN
69 5IC3 C,D GOPC_HUMAN
70 3HS8 P AP2A2_MOUSE
71 3HS9 P AP2B1_RAT
72 3EG6 C WDR5_HUMAN
73 3L3Q B, C IMA1_MOUSE
74 3O71 B MK01_RAT
75 3RZ9 B IMA1_MOUSE
76 3RZ2 C,D TP4A1_RAT
77 3RZX B IMA1_MOUSE
78 4HH6 Z D3GUW1_ECO44
79 4GQ6 B MEN1_HUMAN
80 3WA4 B GRB2_HUMAN
81 3ZMP C,D PTN1_HUMAN
82 3UL1 A IMA1_MOUSE
83 5GG4 E, F, G, H UBP7_HUMAN
84 5GJH B, D GRAP2_HUMAN
85 4QE8 C, D NR1H4_HUMAN
86 4QE6 B NR1H4_HUMAN
87 5E6Q A IMA1_MOUSE
88 5EOD B FA11_HUMAN
89 4LP9 I CARP_CRYPA
90 4M91 B TUSC3_HUMAN
91 4M92 B TUSC3_HUMAN
92 5W4F A, D IMA1_MOUSE
93 4O56 B PLK1_HUMAN
94 4YOS E RBL1_HUMAN
95 4Z63 P PSKR1_ARATH
96 2YJD C, D ESR2_HUMAN
97 4X3O C SIR2_HUMAN
98 4X3P C SIR2_HUMAN
99 2H9P B WDR5_HUMAN
100 2H9N B,D WDR5_HUMAN
101 1LKL B LCK_HUMAN
102 1LKK B LCK_HUMAN
103 3IOL B GLP1R_HUMAN
104 5DNJ B PLK1_MOUSE
105 6P5L D UBP7_HUMAN
106 6Y4Q C, D MDM2_HUMAN
107 1QKB B OPPA_SALTY
108 1QKA B OPPA_SALTY
109 1E6I P GCN5_YEAST
110 6RJP C,D B2LA1_HUMAN
111 1OHE B CC14B_HUMAN
112 1Q1S A,B LT_SV40
113 1G5J B B2CL1_HUMAN
114 1JEV B OPPA_SALTY
115 1JEU B OPPA_SALTY
116 1JET B OPPA_SALTY
117 1B32 B OPPA_SALTY
118 1B46 B OPPA_SALTY
119 1B9J B OPPA_SALTY
120 6JXU B SUMO1_HUMAN
121 6EJ8 B XYLT1_HUMAN
122 6EJ9 B XYLT1_HUMAN
123 1O6P C, D, E, F IMB1_HUMAN
124 5OK6 C, D UBP11_HUMAN
125 2IV8 P, Q AP2B1_HUMAN
126 2OY2 W,Y MMP8_HUMAN
127 2OXW X MMP12_HUMAN
128 2O5G B CALM_CHICK
129 3GLU B SIR3_HUMAN
130 2Y1N B, D CBL_HUMAN
131 3FDL B B2CL1_HUMAN
132 3JZO P MDM4_HUMAN
133 3PDH D NPD_THEMA
134 3RC0 P, Q SETD6_HUMAN
135 4FII B PAK4_HUMAN
136 3ZMQ C PTN1_HUMAN
137 3ZRJ X,Y
138 3SRJ C, D, E, F Q7KQK5_PLAF7
139 5FOS C RADA_PYRFU
140 5GH9 B CBP_HUMAN
141 5TWH E MOB1A_HUMAN
142 5TYI L, M, N, P GRB7_HUMAN
143 5UW5 E, F, G, H R4P353_9CARY
144 5UW7 C, D R4P353_9CARY
145 5K9S B, C IMA1_MOUSE
146 5AFG B MDM2_HUMAN
147 4QSY B PTN11_HUMAN
148 5VLA Z PCSK9_HUMAN
149 5VTB B RBBP4_HUMAN
150 4O6W C PLK1_HUMAN
151 4Y6L C, D SIR2_HUMAN
152 4Z2V C, P HOAVI_HOEPD
153 2Z3L C, D LFTR_ECOLI
154 2Z3N C, D LFTR_ECOLI
155 4X6S L, M GRB7_HUMAN
156 4OKF A RNAS1_BOVIN
157 6HON B, D CNOT9_HUMAN
158 6HOM B, D CNOT9_HUMAN
159 6HV2 B MMP13_HUMAN
160 5X7B L, N PTN11_HUMAN

160
data/non_bird_test.txt Normal file
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@@ -0,0 +1,160 @@
data/bio_assembly/NO_BIRD/6FMP.pdb data/bio_assembly/NO_BIRD/6FMP.pdb C
data/bio_assembly/NO_BIRD/6QWN.pdb data/bio_assembly/NO_BIRD/6QWN.pdb F
data/bio_assembly/NO_BIRD/4D2D.pdb data/bio_assembly/NO_BIRD/4D2D.pdb B
data/bio_assembly/NO_BIRD/6QXP.pdb data/bio_assembly/NO_BIRD/6QXP.pdb I
data/bio_assembly/NO_BIRD/2OBH.pdb data/bio_assembly/NO_BIRD/2OBH.pdb C
data/bio_assembly/NO_BIRD/1YK1.pdb data/bio_assembly/NO_BIRD/1YK1.pdb E
data/bio_assembly/NO_BIRD/3KD7.pdb data/bio_assembly/NO_BIRD/3KD7.pdb G
data/bio_assembly/NO_BIRD/1YC5.pdb data/bio_assembly/NO_BIRD/1YC5.pdb B
data/bio_assembly/NO_BIRD/2H4F.pdb data/bio_assembly/NO_BIRD/2H4F.pdb D
data/bio_assembly/NO_BIRD/6F0Y.pdb data/bio_assembly/NO_BIRD/6F0Y.pdb B
data/bio_assembly/NO_BIRD/5OJ5.pdb data/bio_assembly/NO_BIRD/5OJ5.pdb B
data/bio_assembly/NO_BIRD/5OJR.pdb data/bio_assembly/NO_BIRD/5OJR.pdb E
data/bio_assembly/NO_BIRD/2QBX.pdb data/bio_assembly/NO_BIRD/2QBX.pdb D
data/bio_assembly/NO_BIRD/5D0J.pdb data/bio_assembly/NO_BIRD/5D0J.pdb L
data/bio_assembly/NO_BIRD/3FBR.pdb data/bio_assembly/NO_BIRD/3FBR.pdb B
data/bio_assembly/NO_BIRD/3JR3.pdb data/bio_assembly/NO_BIRD/3JR3.pdb D
data/bio_assembly/NO_BIRD/3SVM.pdb data/bio_assembly/NO_BIRD/3SVM.pdb P
data/bio_assembly/NO_BIRD/4Z5W.pdb data/bio_assembly/NO_BIRD/4Z5W.pdb P
data/bio_assembly/NO_BIRD/5E1D.pdb data/bio_assembly/NO_BIRD/5E1D.pdb D
data/bio_assembly/NO_BIRD/6Q1U.pdb data/bio_assembly/NO_BIRD/6Q1U.pdb C
data/bio_assembly/NO_BIRD/6WZZ.pdb data/bio_assembly/NO_BIRD/6WZZ.pdb B
data/bio_assembly/NO_BIRD/1A1R.pdb data/bio_assembly/NO_BIRD/1A1R.pdb C
data/bio_assembly/NO_BIRD/1EJH.pdb data/bio_assembly/NO_BIRD/1EJH.pdb E
data/bio_assembly/NO_BIRD/1BZH.pdb data/bio_assembly/NO_BIRD/1BZH.pdb I
data/bio_assembly/NO_BIRD/1AQC.pdb data/bio_assembly/NO_BIRD/1AQC.pdb C
data/bio_assembly/NO_BIRD/6TWQ.pdb data/bio_assembly/NO_BIRD/6TWQ.pdb C
data/bio_assembly/NO_BIRD/1YTJ.pdb data/bio_assembly/NO_BIRD/1YTJ.pdb I
data/bio_assembly/NO_BIRD/1YTH.pdb data/bio_assembly/NO_BIRD/1YTH.pdb I
data/bio_assembly/NO_BIRD/1YTG.pdb data/bio_assembly/NO_BIRD/1YTG.pdb I
data/bio_assembly/NO_BIRD/6CD9.pdb data/bio_assembly/NO_BIRD/6CD9.pdb B
data/bio_assembly/NO_BIRD/6C4U.pdb data/bio_assembly/NO_BIRD/6C4U.pdb G
data/bio_assembly/NO_BIRD/5H6Y.pdb data/bio_assembly/NO_BIRD/5H6Y.pdb B
data/bio_assembly/NO_BIRD/5I3L.pdb data/bio_assembly/NO_BIRD/5I3L.pdb C
data/bio_assembly/NO_BIRD/6SEO.pdb data/bio_assembly/NO_BIRD/6SEO.pdb L
data/bio_assembly/NO_BIRD/6SEN.pdb data/bio_assembly/NO_BIRD/6SEN.pdb L
data/bio_assembly/NO_BIRD/2ITK.pdb data/bio_assembly/NO_BIRD/2ITK.pdb B
data/bio_assembly/NO_BIRD/2Q5A.pdb data/bio_assembly/NO_BIRD/2Q5A.pdb B
data/bio_assembly/NO_BIRD/3UKW.pdb data/bio_assembly/NO_BIRD/3UKW.pdb C
data/bio_assembly/NO_BIRD/3UKX.pdb data/bio_assembly/NO_BIRD/3UKX.pdb C
data/bio_assembly/NO_BIRD/2VAY.pdb data/bio_assembly/NO_BIRD/2VAY.pdb B
data/bio_assembly/NO_BIRD/5UW3.pdb data/bio_assembly/NO_BIRD/5UW3.pdb E
data/bio_assembly/NO_BIRD/5U1Q.pdb data/bio_assembly/NO_BIRD/5U1Q.pdb L
data/bio_assembly/NO_BIRD/4ZRT.pdb data/bio_assembly/NO_BIRD/4ZRT.pdb B
data/bio_assembly/NO_BIRD/5EEL.pdb data/bio_assembly/NO_BIRD/5EEL.pdb L
data/bio_assembly/NO_BIRD/5W4E.pdb data/bio_assembly/NO_BIRD/5W4E.pdb A
data/bio_assembly/NO_BIRD/4NY3.pdb data/bio_assembly/NO_BIRD/4NY3.pdb C
data/bio_assembly/NO_BIRD/4AKT.pdb data/bio_assembly/NO_BIRD/4AKT.pdb C
data/bio_assembly/NO_BIRD/5XWR.pdb data/bio_assembly/NO_BIRD/5XWR.pdb C
data/bio_assembly/NO_BIRD/2H4H.pdb data/bio_assembly/NO_BIRD/2H4H.pdb B
data/bio_assembly/NO_BIRD/3AGY.pdb data/bio_assembly/NO_BIRD/3AGY.pdb C
data/bio_assembly/NO_BIRD/3AGZ.pdb data/bio_assembly/NO_BIRD/3AGZ.pdb C
data/bio_assembly/NO_BIRD/3TWS.pdb data/bio_assembly/NO_BIRD/3TWS.pdb E
data/bio_assembly/NO_BIRD/3TWT.pdb data/bio_assembly/NO_BIRD/3TWT.pdb E
data/bio_assembly/NO_BIRD/3TWV.pdb data/bio_assembly/NO_BIRD/3TWV.pdb E
data/bio_assembly/NO_BIRD/4DRW.pdb data/bio_assembly/NO_BIRD/4DRW.pdb E
data/bio_assembly/NO_BIRD/1EJ4.pdb data/bio_assembly/NO_BIRD/1EJ4.pdb B
data/bio_assembly/NO_BIRD/6TWX.pdb data/bio_assembly/NO_BIRD/6TWX.pdb C
data/bio_assembly/NO_BIRD/5K4F.pdb data/bio_assembly/NO_BIRD/5K4F.pdb C
data/bio_assembly/NO_BIRD/1XJ7.pdb data/bio_assembly/NO_BIRD/1XJ7.pdb B
data/bio_assembly/NO_BIRD/1WBP.pdb data/bio_assembly/NO_BIRD/1WBP.pdb B
data/bio_assembly/NO_BIRD/1KA6.pdb data/bio_assembly/NO_BIRD/1KA6.pdb B
data/bio_assembly/NO_BIRD/6CDG.pdb data/bio_assembly/NO_BIRD/6CDG.pdb B
data/bio_assembly/NO_BIRD/5N7F.pdb data/bio_assembly/NO_BIRD/5N7F.pdb C
data/bio_assembly/NO_BIRD/6CD8.pdb data/bio_assembly/NO_BIRD/6CD8.pdb C
data/bio_assembly/NO_BIRD/5N7D.pdb data/bio_assembly/NO_BIRD/5N7D.pdb C
data/bio_assembly/NO_BIRD/2IG0.pdb data/bio_assembly/NO_BIRD/2IG0.pdb B
data/bio_assembly/NO_BIRD/2RLY.pdb data/bio_assembly/NO_BIRD/2RLY.pdb P
data/bio_assembly/NO_BIRD/5D94.pdb data/bio_assembly/NO_BIRD/5D94.pdb B
data/bio_assembly/NO_BIRD/5IC3.pdb data/bio_assembly/NO_BIRD/5IC3.pdb C
data/bio_assembly/NO_BIRD/3HS8.pdb data/bio_assembly/NO_BIRD/3HS8.pdb P
data/bio_assembly/NO_BIRD/3HS9.pdb data/bio_assembly/NO_BIRD/3HS9.pdb P
data/bio_assembly/NO_BIRD/3EG6.pdb data/bio_assembly/NO_BIRD/3EG6.pdb C
data/bio_assembly/NO_BIRD/3L3Q.pdb data/bio_assembly/NO_BIRD/3L3Q.pdb B
data/bio_assembly/NO_BIRD/3O71.pdb data/bio_assembly/NO_BIRD/3O71.pdb B
data/bio_assembly/NO_BIRD/3RZ9.pdb data/bio_assembly/NO_BIRD/3RZ9.pdb B
data/bio_assembly/NO_BIRD/3RZ2.pdb data/bio_assembly/NO_BIRD/3RZ2.pdb C
data/bio_assembly/NO_BIRD/3RZX.pdb data/bio_assembly/NO_BIRD/3RZX.pdb B
data/bio_assembly/NO_BIRD/4HH6.pdb data/bio_assembly/NO_BIRD/4HH6.pdb Z
data/bio_assembly/NO_BIRD/4GQ6.pdb data/bio_assembly/NO_BIRD/4GQ6.pdb B
data/bio_assembly/NO_BIRD/3WA4.pdb data/bio_assembly/NO_BIRD/3WA4.pdb B
data/bio_assembly/NO_BIRD/3ZMP.pdb data/bio_assembly/NO_BIRD/3ZMP.pdb C
data/bio_assembly/NO_BIRD/3UL1.pdb data/bio_assembly/NO_BIRD/3UL1.pdb A
data/bio_assembly/NO_BIRD/5GG4.pdb data/bio_assembly/NO_BIRD/5GG4.pdb E
data/bio_assembly/NO_BIRD/5GJH.pdb data/bio_assembly/NO_BIRD/5GJH.pdb B
data/bio_assembly/NO_BIRD/4QE8.pdb data/bio_assembly/NO_BIRD/4QE8.pdb C
data/bio_assembly/NO_BIRD/4QE6.pdb data/bio_assembly/NO_BIRD/4QE6.pdb B
data/bio_assembly/NO_BIRD/5E6Q.pdb data/bio_assembly/NO_BIRD/5E6Q.pdb A
data/bio_assembly/NO_BIRD/5EOD.pdb data/bio_assembly/NO_BIRD/5EOD.pdb B
data/bio_assembly/NO_BIRD/4LP9.pdb data/bio_assembly/NO_BIRD/4LP9.pdb I
data/bio_assembly/NO_BIRD/4M91.pdb data/bio_assembly/NO_BIRD/4M91.pdb B
data/bio_assembly/NO_BIRD/4M92.pdb data/bio_assembly/NO_BIRD/4M92.pdb B
data/bio_assembly/NO_BIRD/5W4F.pdb data/bio_assembly/NO_BIRD/5W4F.pdb A
data/bio_assembly/NO_BIRD/4O56.pdb data/bio_assembly/NO_BIRD/4O56.pdb B
data/bio_assembly/NO_BIRD/4YOS.pdb data/bio_assembly/NO_BIRD/4YOS.pdb E
data/bio_assembly/NO_BIRD/4Z63.pdb data/bio_assembly/NO_BIRD/4Z63.pdb P
data/bio_assembly/NO_BIRD/2YJD.pdb data/bio_assembly/NO_BIRD/2YJD.pdb C
data/bio_assembly/NO_BIRD/4X3O.pdb data/bio_assembly/NO_BIRD/4X3O.pdb C
data/bio_assembly/NO_BIRD/4X3P.pdb data/bio_assembly/NO_BIRD/4X3P.pdb C
data/bio_assembly/NO_BIRD/2H9P.pdb data/bio_assembly/NO_BIRD/2H9P.pdb B
data/bio_assembly/NO_BIRD/2H9N.pdb data/bio_assembly/NO_BIRD/2H9N.pdb B
data/bio_assembly/NO_BIRD/1LKL.pdb data/bio_assembly/NO_BIRD/1LKL.pdb B
data/bio_assembly/NO_BIRD/1LKK.pdb data/bio_assembly/NO_BIRD/1LKK.pdb B
data/bio_assembly/NO_BIRD/3IOL.pdb data/bio_assembly/NO_BIRD/3IOL.pdb B
data/bio_assembly/NO_BIRD/5DNJ.pdb data/bio_assembly/NO_BIRD/5DNJ.pdb B
data/bio_assembly/NO_BIRD/6P5L.pdb data/bio_assembly/NO_BIRD/6P5L.pdb D
data/bio_assembly/NO_BIRD/6Y4Q.pdb data/bio_assembly/NO_BIRD/6Y4Q.pdb C
data/bio_assembly/NO_BIRD/1QKB.pdb data/bio_assembly/NO_BIRD/1QKB.pdb B
data/bio_assembly/NO_BIRD/1QKA.pdb data/bio_assembly/NO_BIRD/1QKA.pdb B
data/bio_assembly/NO_BIRD/1E6I.pdb data/bio_assembly/NO_BIRD/1E6I.pdb P
data/bio_assembly/NO_BIRD/6RJP.pdb data/bio_assembly/NO_BIRD/6RJP.pdb C
data/bio_assembly/NO_BIRD/1OHE.pdb data/bio_assembly/NO_BIRD/1OHE.pdb B
data/bio_assembly/NO_BIRD/1Q1S.pdb data/bio_assembly/NO_BIRD/1Q1S.pdb A
data/bio_assembly/NO_BIRD/1G5J.pdb data/bio_assembly/NO_BIRD/1G5J.pdb B
data/bio_assembly/NO_BIRD/1JEV.pdb data/bio_assembly/NO_BIRD/1JEV.pdb B
data/bio_assembly/NO_BIRD/1JEU.pdb data/bio_assembly/NO_BIRD/1JEU.pdb B
data/bio_assembly/NO_BIRD/1JET.pdb data/bio_assembly/NO_BIRD/1JET.pdb B
data/bio_assembly/NO_BIRD/1B32.pdb data/bio_assembly/NO_BIRD/1B32.pdb B
data/bio_assembly/NO_BIRD/1B46.pdb data/bio_assembly/NO_BIRD/1B46.pdb B
data/bio_assembly/NO_BIRD/1B9J.pdb data/bio_assembly/NO_BIRD/1B9J.pdb B
data/bio_assembly/NO_BIRD/6JXU.pdb data/bio_assembly/NO_BIRD/6JXU.pdb B
data/bio_assembly/NO_BIRD/6EJ8.pdb data/bio_assembly/NO_BIRD/6EJ8.pdb B
data/bio_assembly/NO_BIRD/6EJ9.pdb data/bio_assembly/NO_BIRD/6EJ9.pdb B
data/bio_assembly/NO_BIRD/1O6P.pdb data/bio_assembly/NO_BIRD/1O6P.pdb C
data/bio_assembly/NO_BIRD/5OK6.pdb data/bio_assembly/NO_BIRD/5OK6.pdb C
data/bio_assembly/NO_BIRD/2IV8.pdb data/bio_assembly/NO_BIRD/2IV8.pdb P
data/bio_assembly/NO_BIRD/2OY2.pdb data/bio_assembly/NO_BIRD/2OY2.pdb W
data/bio_assembly/NO_BIRD/2OXW.pdb data/bio_assembly/NO_BIRD/2OXW.pdb X
data/bio_assembly/NO_BIRD/2O5G.pdb data/bio_assembly/NO_BIRD/2O5G.pdb B
data/bio_assembly/NO_BIRD/3GLU.pdb data/bio_assembly/NO_BIRD/3GLU.pdb B
data/bio_assembly/NO_BIRD/2Y1N.pdb data/bio_assembly/NO_BIRD/2Y1N.pdb B
data/bio_assembly/NO_BIRD/3FDL.pdb data/bio_assembly/NO_BIRD/3FDL.pdb B
data/bio_assembly/NO_BIRD/3JZO.pdb data/bio_assembly/NO_BIRD/3JZO.pdb P
data/bio_assembly/NO_BIRD/3PDH.pdb data/bio_assembly/NO_BIRD/3PDH.pdb D
data/bio_assembly/NO_BIRD/3RC0.pdb data/bio_assembly/NO_BIRD/3RC0.pdb P
data/bio_assembly/NO_BIRD/4FII.pdb data/bio_assembly/NO_BIRD/4FII.pdb B
data/bio_assembly/NO_BIRD/3ZMQ.pdb data/bio_assembly/NO_BIRD/3ZMQ.pdb C
data/bio_assembly/NO_BIRD/3ZRJ.pdb data/bio_assembly/NO_BIRD/3ZRJ.pdb X
data/bio_assembly/NO_BIRD/3SRJ.pdb data/bio_assembly/NO_BIRD/3SRJ.pdb C
data/bio_assembly/NO_BIRD/5FOS.pdb data/bio_assembly/NO_BIRD/5FOS.pdb C
data/bio_assembly/NO_BIRD/5GH9.pdb data/bio_assembly/NO_BIRD/5GH9.pdb B
data/bio_assembly/NO_BIRD/5TWH.pdb data/bio_assembly/NO_BIRD/5TWH.pdb E
data/bio_assembly/NO_BIRD/5TYI.pdb data/bio_assembly/NO_BIRD/5TYI.pdb L
data/bio_assembly/NO_BIRD/5UW5.pdb data/bio_assembly/NO_BIRD/5UW5.pdb E
data/bio_assembly/NO_BIRD/5UW7.pdb data/bio_assembly/NO_BIRD/5UW7.pdb C
data/bio_assembly/NO_BIRD/5K9S.pdb data/bio_assembly/NO_BIRD/5K9S.pdb B
data/bio_assembly/NO_BIRD/5AFG.pdb data/bio_assembly/NO_BIRD/5AFG.pdb B
data/bio_assembly/NO_BIRD/4QSY.pdb data/bio_assembly/NO_BIRD/4QSY.pdb B
data/bio_assembly/NO_BIRD/5VLA.pdb data/bio_assembly/NO_BIRD/5VLA.pdb Z
data/bio_assembly/NO_BIRD/5VTB.pdb data/bio_assembly/NO_BIRD/5VTB.pdb B
data/bio_assembly/NO_BIRD/4O6W.pdb data/bio_assembly/NO_BIRD/4O6W.pdb C
data/bio_assembly/NO_BIRD/4Y6L.pdb data/bio_assembly/NO_BIRD/4Y6L.pdb C
data/bio_assembly/NO_BIRD/4Z2V.pdb data/bio_assembly/NO_BIRD/4Z2V.pdb C
data/bio_assembly/NO_BIRD/2Z3L.pdb data/bio_assembly/NO_BIRD/2Z3L.pdb C
data/bio_assembly/NO_BIRD/2Z3N.pdb data/bio_assembly/NO_BIRD/2Z3N.pdb C
data/bio_assembly/NO_BIRD/4X6S.pdb data/bio_assembly/NO_BIRD/4X6S.pdb L
data/bio_assembly/NO_BIRD/4OKF.pdb data/bio_assembly/NO_BIRD/4OKF.pdb A
data/bio_assembly/NO_BIRD/6HON.pdb data/bio_assembly/NO_BIRD/6HON.pdb B
data/bio_assembly/NO_BIRD/6HOM.pdb data/bio_assembly/NO_BIRD/6HOM.pdb B
data/bio_assembly/NO_BIRD/6HV2.pdb data/bio_assembly/NO_BIRD/6HV2.pdb B
data/bio_assembly/NO_BIRD/5X7B.pdb data/bio_assembly/NO_BIRD/5X7B.pdb L

47
data/pdb_manager.py Normal file
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import os
import shutil
import fnmatch
from os import path
import pandas as pd
def main():
out_path = "bio_assembly/BIRD"
doss = "bio_assembly/BIRD"
write_path = "data/bio_assembly/NO_BIRD/"
# rename the original file
#result = find_files("*.pdb",doss)
my_cols = [str(i) for i in range(45)]
data = pd.read_csv('non_BIRD.csv',sep=';|,|\t',names= my_cols,engine='python')
write_txt(data,write_path)
'''for files in result:
os.rename(files,out_path+files[len(doss):-1]) '''
'''result = find_files("*.pdb*","RCSB_test1")
for files in result:
os.remove(files)'''
def find_files(pattern, search_path):
result = []
# Wlaking top-down from the root
for root, dir, files in os.walk(search_path):
for filename in files:
if fnmatch.fnmatch(filename, pattern):
result.append(os.path.join(root, filename))
return result
def write_txt(data,write_path):
file = open('non_bird_test.txt','w+')
for i in range(len(data)):
file.write(write_path+str(data['0'][i])+'.pdb'+' '+write_path+str(data['0'][i])+'.pdb'+' '+ str(data['1'][i])+'\n')
file.close()
if __name__ == "__main__":
main()

27
data/peptide-test.txt Normal file
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data/peptide_data/3uqp.pdb data/peptide_data/3uqp.pdb B
data/peptide_data/3uri.pdb data/peptide_data/3uri.pdb B
data/peptide_data/4rcp.pdb data/peptide_data/4rcp.pdb B
data/peptide_data/4tpg.pdb data/peptide_data/4tpg.pdb E
data/peptide_data/5jxh.pdb data/peptide_data/5jxh.pdb H
data/peptide_data/4o6w.pdb data/peptide_data/4o6w.pdb C
data/peptide_data/4k1e.pdb data/peptide_data/4k1e.pdb B
data/peptide_data/4dv9.pdb data/peptide_data/4dv9.pdb B
data/peptide_data/4fbx.pdb data/peptide_data/4fbx.pdb B
data/peptide_data/4g35.pdb data/peptide_data/4g35.pdb B
data/peptide_data/5dnj.pdb data/peptide_data/5dnj.pdb B
data/peptide_data/4whh.pdb data/peptide_data/4whh.pdb B
data/peptide_data/4whk.pdb data/peptide_data/4whk.pdb B
data/peptide_data/4whl.pdb data/peptide_data/4whl.pdb B
data/peptide_data/1sfi.pdb data/peptide_data/1sfi.pdb I
data/peptide_data/3rq7.pdb data/peptide_data/3rq7.pdb B
data/peptide_data/3sna.pdb data/peptide_data/3sna.pdb H
data/peptide_data/3snb.pdb data/peptide_data/3snb.pdb H
data/peptide_data/3snc.pdb data/peptide_data/3snc.pdb H
data/peptide_data/3snd.pdb data/peptide_data/3snd.pdb C
data/peptide_data/1okx.pdb data/peptide_data/1okx.pdb C
data/peptide_data/3s70.pdb data/peptide_data/3s70.pdb B
data/peptide_data/3snd.pdb data/peptide_data/3snd.pdb D
data/peptide_data/1okx.pdb data/peptide_data/1okx.pdb D
data/peptide_data/3s70.pdb data/peptide_data/3s70.pdb D
data/peptide_data/1okx1.pdb data/peptide_data/1okx1.pdb C
data/peptide_data/1okx1.pdb data/peptide_data/1okx1.pdb C

26
run_tests.py Normal file
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from multiprocessing import Pool
import subprocess
import os
import time
def run_command(mr):
max_rads = [6.2,7.0,7.8,8.6,9.4,10.2]
clust_methods = ['s','m','a']
#max_rad = 6.2
#clust_method = 's'
distance = 2.4
for max_rad in max_rads:
for clust_method in clust_methods:
command = "bin/tpocket -L data/bird_test.txt -m {} -M {} -C {} -D {} -o result_stats/m{}_M{}_C{}_D{}_stats_p -g result_stats/m{}_M{}_C{}_D{}_stats_g".format(mr,max_rad,clust_method,distance,mr,max_rad,clust_method,distance,mr,max_rad,clust_method,distance)
subprocess.Popen(command, shell=True)
def main():
min_rad = [3.4,3.6,3.8,4.0,4.2,4.4,4.6]
pool = Pool()
pool.map(run_command,min_rad)
main()