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fix_overfl
...
peptide
| Author | SHA1 | Date | |
|---|---|---|---|
|
879ad730a6 |
413
data/all_pdb_test.txt
Normal file
413
data/all_pdb_test.txt
Normal file
@@ -0,0 +1,413 @@
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||||
data/bio_assembly/NO_BIRD/6FMP.pdb data/bio_assembly/NO_BIRD/6FMP.pdb C
|
||||
data/bio_assembly/NO_BIRD/6QWN.pdb data/bio_assembly/NO_BIRD/6QWN.pdb F
|
||||
data/bio_assembly/NO_BIRD/4D2D.pdb data/bio_assembly/NO_BIRD/4D2D.pdb B
|
||||
data/bio_assembly/NO_BIRD/6QXP.pdb data/bio_assembly/NO_BIRD/6QXP.pdb I
|
||||
data/bio_assembly/NO_BIRD/2OBH.pdb data/bio_assembly/NO_BIRD/2OBH.pdb C
|
||||
data/bio_assembly/NO_BIRD/1YK1.pdb data/bio_assembly/NO_BIRD/1YK1.pdb E
|
||||
data/bio_assembly/NO_BIRD/3KD7.pdb data/bio_assembly/NO_BIRD/3KD7.pdb G
|
||||
data/bio_assembly/NO_BIRD/1YC5.pdb data/bio_assembly/NO_BIRD/1YC5.pdb B
|
||||
data/bio_assembly/NO_BIRD/2H4F.pdb data/bio_assembly/NO_BIRD/2H4F.pdb D
|
||||
data/bio_assembly/NO_BIRD/6F0Y.pdb data/bio_assembly/NO_BIRD/6F0Y.pdb B
|
||||
data/bio_assembly/NO_BIRD/5OJ5.pdb data/bio_assembly/NO_BIRD/5OJ5.pdb B
|
||||
data/bio_assembly/NO_BIRD/5OJR.pdb data/bio_assembly/NO_BIRD/5OJR.pdb E
|
||||
data/bio_assembly/NO_BIRD/2QBX.pdb data/bio_assembly/NO_BIRD/2QBX.pdb D
|
||||
data/bio_assembly/NO_BIRD/5D0J.pdb data/bio_assembly/NO_BIRD/5D0J.pdb L
|
||||
data/bio_assembly/NO_BIRD/3FBR.pdb data/bio_assembly/NO_BIRD/3FBR.pdb B
|
||||
data/bio_assembly/NO_BIRD/3JR3.pdb data/bio_assembly/NO_BIRD/3JR3.pdb D
|
||||
data/bio_assembly/NO_BIRD/3SVM.pdb data/bio_assembly/NO_BIRD/3SVM.pdb P
|
||||
data/bio_assembly/NO_BIRD/4Z5W.pdb data/bio_assembly/NO_BIRD/4Z5W.pdb P
|
||||
data/bio_assembly/NO_BIRD/5E1D.pdb data/bio_assembly/NO_BIRD/5E1D.pdb D
|
||||
data/bio_assembly/NO_BIRD/6Q1U.pdb data/bio_assembly/NO_BIRD/6Q1U.pdb C
|
||||
data/bio_assembly/NO_BIRD/6WZZ.pdb data/bio_assembly/NO_BIRD/6WZZ.pdb B
|
||||
data/bio_assembly/NO_BIRD/1A1R.pdb data/bio_assembly/NO_BIRD/1A1R.pdb C
|
||||
data/bio_assembly/NO_BIRD/1EJH.pdb data/bio_assembly/NO_BIRD/1EJH.pdb E
|
||||
data/bio_assembly/NO_BIRD/1BZH.pdb data/bio_assembly/NO_BIRD/1BZH.pdb I
|
||||
data/bio_assembly/NO_BIRD/1AQC.pdb data/bio_assembly/NO_BIRD/1AQC.pdb C
|
||||
data/bio_assembly/NO_BIRD/6TWQ.pdb data/bio_assembly/NO_BIRD/6TWQ.pdb C
|
||||
data/bio_assembly/NO_BIRD/1YTJ.pdb data/bio_assembly/NO_BIRD/1YTJ.pdb I
|
||||
data/bio_assembly/NO_BIRD/1YTH.pdb data/bio_assembly/NO_BIRD/1YTH.pdb I
|
||||
data/bio_assembly/NO_BIRD/1YTG.pdb data/bio_assembly/NO_BIRD/1YTG.pdb I
|
||||
data/bio_assembly/NO_BIRD/6CD9.pdb data/bio_assembly/NO_BIRD/6CD9.pdb B
|
||||
data/bio_assembly/NO_BIRD/6C4U.pdb data/bio_assembly/NO_BIRD/6C4U.pdb G
|
||||
data/bio_assembly/NO_BIRD/5H6Y.pdb data/bio_assembly/NO_BIRD/5H6Y.pdb B
|
||||
data/bio_assembly/NO_BIRD/5I3L.pdb data/bio_assembly/NO_BIRD/5I3L.pdb C
|
||||
data/bio_assembly/NO_BIRD/6SEO.pdb data/bio_assembly/NO_BIRD/6SEO.pdb L
|
||||
data/bio_assembly/NO_BIRD/6SEN.pdb data/bio_assembly/NO_BIRD/6SEN.pdb L
|
||||
data/bio_assembly/NO_BIRD/2ITK.pdb data/bio_assembly/NO_BIRD/2ITK.pdb B
|
||||
data/bio_assembly/NO_BIRD/2Q5A.pdb data/bio_assembly/NO_BIRD/2Q5A.pdb B
|
||||
data/bio_assembly/NO_BIRD/3UKW.pdb data/bio_assembly/NO_BIRD/3UKW.pdb C
|
||||
data/bio_assembly/NO_BIRD/3UKX.pdb data/bio_assembly/NO_BIRD/3UKX.pdb C
|
||||
data/bio_assembly/NO_BIRD/2VAY.pdb data/bio_assembly/NO_BIRD/2VAY.pdb B
|
||||
data/bio_assembly/NO_BIRD/5UW3.pdb data/bio_assembly/NO_BIRD/5UW3.pdb E
|
||||
data/bio_assembly/NO_BIRD/5U1Q.pdb data/bio_assembly/NO_BIRD/5U1Q.pdb L
|
||||
data/bio_assembly/NO_BIRD/4ZRT.pdb data/bio_assembly/NO_BIRD/4ZRT.pdb B
|
||||
data/bio_assembly/NO_BIRD/5EEL.pdb data/bio_assembly/NO_BIRD/5EEL.pdb L
|
||||
data/bio_assembly/NO_BIRD/5W4E.pdb data/bio_assembly/NO_BIRD/5W4E.pdb A
|
||||
data/bio_assembly/NO_BIRD/4NY3.pdb data/bio_assembly/NO_BIRD/4NY3.pdb C
|
||||
data/bio_assembly/NO_BIRD/4AKT.pdb data/bio_assembly/NO_BIRD/4AKT.pdb C
|
||||
data/bio_assembly/NO_BIRD/5XWR.pdb data/bio_assembly/NO_BIRD/5XWR.pdb C
|
||||
data/bio_assembly/NO_BIRD/2H4H.pdb data/bio_assembly/NO_BIRD/2H4H.pdb B
|
||||
data/bio_assembly/NO_BIRD/3AGY.pdb data/bio_assembly/NO_BIRD/3AGY.pdb C
|
||||
data/bio_assembly/NO_BIRD/3AGZ.pdb data/bio_assembly/NO_BIRD/3AGZ.pdb C
|
||||
data/bio_assembly/NO_BIRD/3TWS.pdb data/bio_assembly/NO_BIRD/3TWS.pdb E
|
||||
data/bio_assembly/NO_BIRD/3TWT.pdb data/bio_assembly/NO_BIRD/3TWT.pdb E
|
||||
data/bio_assembly/NO_BIRD/3TWV.pdb data/bio_assembly/NO_BIRD/3TWV.pdb E
|
||||
data/bio_assembly/NO_BIRD/4DRW.pdb data/bio_assembly/NO_BIRD/4DRW.pdb E
|
||||
data/bio_assembly/NO_BIRD/1EJ4.pdb data/bio_assembly/NO_BIRD/1EJ4.pdb B
|
||||
data/bio_assembly/NO_BIRD/6TWX.pdb data/bio_assembly/NO_BIRD/6TWX.pdb C
|
||||
data/bio_assembly/NO_BIRD/5K4F.pdb data/bio_assembly/NO_BIRD/5K4F.pdb C
|
||||
data/bio_assembly/NO_BIRD/1XJ7.pdb data/bio_assembly/NO_BIRD/1XJ7.pdb B
|
||||
data/bio_assembly/NO_BIRD/1WBP.pdb data/bio_assembly/NO_BIRD/1WBP.pdb B
|
||||
data/bio_assembly/NO_BIRD/1KA6.pdb data/bio_assembly/NO_BIRD/1KA6.pdb B
|
||||
data/bio_assembly/NO_BIRD/6CDG.pdb data/bio_assembly/NO_BIRD/6CDG.pdb B
|
||||
data/bio_assembly/NO_BIRD/5N7F.pdb data/bio_assembly/NO_BIRD/5N7F.pdb C
|
||||
data/bio_assembly/NO_BIRD/6CD8.pdb data/bio_assembly/NO_BIRD/6CD8.pdb C
|
||||
data/bio_assembly/NO_BIRD/5N7D.pdb data/bio_assembly/NO_BIRD/5N7D.pdb C
|
||||
data/bio_assembly/NO_BIRD/2IG0.pdb data/bio_assembly/NO_BIRD/2IG0.pdb B
|
||||
data/bio_assembly/NO_BIRD/2RLY.pdb data/bio_assembly/NO_BIRD/2RLY.pdb P
|
||||
data/bio_assembly/NO_BIRD/5D94.pdb data/bio_assembly/NO_BIRD/5D94.pdb B
|
||||
data/bio_assembly/NO_BIRD/5IC3.pdb data/bio_assembly/NO_BIRD/5IC3.pdb C
|
||||
data/bio_assembly/NO_BIRD/3HS8.pdb data/bio_assembly/NO_BIRD/3HS8.pdb P
|
||||
data/bio_assembly/NO_BIRD/3HS9.pdb data/bio_assembly/NO_BIRD/3HS9.pdb P
|
||||
data/bio_assembly/NO_BIRD/3EG6.pdb data/bio_assembly/NO_BIRD/3EG6.pdb C
|
||||
data/bio_assembly/NO_BIRD/3L3Q.pdb data/bio_assembly/NO_BIRD/3L3Q.pdb B
|
||||
data/bio_assembly/NO_BIRD/3O71.pdb data/bio_assembly/NO_BIRD/3O71.pdb B
|
||||
data/bio_assembly/NO_BIRD/3RZ9.pdb data/bio_assembly/NO_BIRD/3RZ9.pdb B
|
||||
data/bio_assembly/NO_BIRD/3RZ2.pdb data/bio_assembly/NO_BIRD/3RZ2.pdb C
|
||||
data/bio_assembly/NO_BIRD/3RZX.pdb data/bio_assembly/NO_BIRD/3RZX.pdb B
|
||||
data/bio_assembly/NO_BIRD/4HH6.pdb data/bio_assembly/NO_BIRD/4HH6.pdb Z
|
||||
data/bio_assembly/NO_BIRD/4GQ6.pdb data/bio_assembly/NO_BIRD/4GQ6.pdb B
|
||||
data/bio_assembly/NO_BIRD/3WA4.pdb data/bio_assembly/NO_BIRD/3WA4.pdb B
|
||||
data/bio_assembly/NO_BIRD/3ZMP.pdb data/bio_assembly/NO_BIRD/3ZMP.pdb C
|
||||
data/bio_assembly/NO_BIRD/3UL1.pdb data/bio_assembly/NO_BIRD/3UL1.pdb A
|
||||
data/bio_assembly/NO_BIRD/5GG4.pdb data/bio_assembly/NO_BIRD/5GG4.pdb E
|
||||
data/bio_assembly/NO_BIRD/5GJH.pdb data/bio_assembly/NO_BIRD/5GJH.pdb B
|
||||
data/bio_assembly/NO_BIRD/4QE8.pdb data/bio_assembly/NO_BIRD/4QE8.pdb C
|
||||
data/bio_assembly/NO_BIRD/4QE6.pdb data/bio_assembly/NO_BIRD/4QE6.pdb B
|
||||
data/bio_assembly/NO_BIRD/5E6Q.pdb data/bio_assembly/NO_BIRD/5E6Q.pdb A
|
||||
data/bio_assembly/NO_BIRD/5EOD.pdb data/bio_assembly/NO_BIRD/5EOD.pdb B
|
||||
data/bio_assembly/NO_BIRD/4LP9.pdb data/bio_assembly/NO_BIRD/4LP9.pdb I
|
||||
data/bio_assembly/NO_BIRD/4M91.pdb data/bio_assembly/NO_BIRD/4M91.pdb B
|
||||
data/bio_assembly/NO_BIRD/4M92.pdb data/bio_assembly/NO_BIRD/4M92.pdb B
|
||||
data/bio_assembly/NO_BIRD/5W4F.pdb data/bio_assembly/NO_BIRD/5W4F.pdb A
|
||||
data/bio_assembly/NO_BIRD/4O56.pdb data/bio_assembly/NO_BIRD/4O56.pdb B
|
||||
data/bio_assembly/NO_BIRD/4YOS.pdb data/bio_assembly/NO_BIRD/4YOS.pdb E
|
||||
data/bio_assembly/NO_BIRD/4Z63.pdb data/bio_assembly/NO_BIRD/4Z63.pdb P
|
||||
data/bio_assembly/NO_BIRD/2YJD.pdb data/bio_assembly/NO_BIRD/2YJD.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X3O.pdb data/bio_assembly/NO_BIRD/4X3O.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X3P.pdb data/bio_assembly/NO_BIRD/4X3P.pdb C
|
||||
data/bio_assembly/NO_BIRD/2H9P.pdb data/bio_assembly/NO_BIRD/2H9P.pdb B
|
||||
data/bio_assembly/NO_BIRD/2H9N.pdb data/bio_assembly/NO_BIRD/2H9N.pdb B
|
||||
data/bio_assembly/NO_BIRD/1LKL.pdb data/bio_assembly/NO_BIRD/1LKL.pdb B
|
||||
data/bio_assembly/NO_BIRD/1LKK.pdb data/bio_assembly/NO_BIRD/1LKK.pdb B
|
||||
data/bio_assembly/NO_BIRD/3IOL.pdb data/bio_assembly/NO_BIRD/3IOL.pdb B
|
||||
data/bio_assembly/NO_BIRD/5DNJ.pdb data/bio_assembly/NO_BIRD/5DNJ.pdb B
|
||||
data/bio_assembly/NO_BIRD/6P5L.pdb data/bio_assembly/NO_BIRD/6P5L.pdb D
|
||||
data/bio_assembly/NO_BIRD/6Y4Q.pdb data/bio_assembly/NO_BIRD/6Y4Q.pdb C
|
||||
data/bio_assembly/NO_BIRD/1QKB.pdb data/bio_assembly/NO_BIRD/1QKB.pdb B
|
||||
data/bio_assembly/NO_BIRD/1QKA.pdb data/bio_assembly/NO_BIRD/1QKA.pdb B
|
||||
data/bio_assembly/NO_BIRD/1E6I.pdb data/bio_assembly/NO_BIRD/1E6I.pdb P
|
||||
data/bio_assembly/NO_BIRD/6RJP.pdb data/bio_assembly/NO_BIRD/6RJP.pdb C
|
||||
data/bio_assembly/NO_BIRD/1OHE.pdb data/bio_assembly/NO_BIRD/1OHE.pdb B
|
||||
data/bio_assembly/NO_BIRD/1Q1S.pdb data/bio_assembly/NO_BIRD/1Q1S.pdb A
|
||||
data/bio_assembly/NO_BIRD/1G5J.pdb data/bio_assembly/NO_BIRD/1G5J.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JEV.pdb data/bio_assembly/NO_BIRD/1JEV.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JEU.pdb data/bio_assembly/NO_BIRD/1JEU.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JET.pdb data/bio_assembly/NO_BIRD/1JET.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B32.pdb data/bio_assembly/NO_BIRD/1B32.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B46.pdb data/bio_assembly/NO_BIRD/1B46.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B9J.pdb data/bio_assembly/NO_BIRD/1B9J.pdb B
|
||||
data/bio_assembly/NO_BIRD/6JXU.pdb data/bio_assembly/NO_BIRD/6JXU.pdb B
|
||||
data/bio_assembly/NO_BIRD/6EJ8.pdb data/bio_assembly/NO_BIRD/6EJ8.pdb B
|
||||
data/bio_assembly/NO_BIRD/6EJ9.pdb data/bio_assembly/NO_BIRD/6EJ9.pdb B
|
||||
data/bio_assembly/NO_BIRD/1O6P.pdb data/bio_assembly/NO_BIRD/1O6P.pdb C
|
||||
data/bio_assembly/NO_BIRD/5OK6.pdb data/bio_assembly/NO_BIRD/5OK6.pdb C
|
||||
data/bio_assembly/NO_BIRD/2IV8.pdb data/bio_assembly/NO_BIRD/2IV8.pdb P
|
||||
data/bio_assembly/NO_BIRD/2OY2.pdb data/bio_assembly/NO_BIRD/2OY2.pdb W
|
||||
data/bio_assembly/NO_BIRD/2OXW.pdb data/bio_assembly/NO_BIRD/2OXW.pdb X
|
||||
data/bio_assembly/NO_BIRD/2O5G.pdb data/bio_assembly/NO_BIRD/2O5G.pdb B
|
||||
data/bio_assembly/NO_BIRD/3GLU.pdb data/bio_assembly/NO_BIRD/3GLU.pdb B
|
||||
data/bio_assembly/NO_BIRD/2Y1N.pdb data/bio_assembly/NO_BIRD/2Y1N.pdb B
|
||||
data/bio_assembly/NO_BIRD/3FDL.pdb data/bio_assembly/NO_BIRD/3FDL.pdb B
|
||||
data/bio_assembly/NO_BIRD/3JZO.pdb data/bio_assembly/NO_BIRD/3JZO.pdb P
|
||||
data/bio_assembly/NO_BIRD/3PDH.pdb data/bio_assembly/NO_BIRD/3PDH.pdb D
|
||||
data/bio_assembly/NO_BIRD/3RC0.pdb data/bio_assembly/NO_BIRD/3RC0.pdb P
|
||||
data/bio_assembly/NO_BIRD/4FII.pdb data/bio_assembly/NO_BIRD/4FII.pdb B
|
||||
data/bio_assembly/NO_BIRD/3ZMQ.pdb data/bio_assembly/NO_BIRD/3ZMQ.pdb C
|
||||
data/bio_assembly/NO_BIRD/3ZRJ.pdb data/bio_assembly/NO_BIRD/3ZRJ.pdb X
|
||||
data/bio_assembly/NO_BIRD/3SRJ.pdb data/bio_assembly/NO_BIRD/3SRJ.pdb C
|
||||
data/bio_assembly/NO_BIRD/5FOS.pdb data/bio_assembly/NO_BIRD/5FOS.pdb C
|
||||
data/bio_assembly/NO_BIRD/5GH9.pdb data/bio_assembly/NO_BIRD/5GH9.pdb B
|
||||
data/bio_assembly/NO_BIRD/5TWH.pdb data/bio_assembly/NO_BIRD/5TWH.pdb E
|
||||
data/bio_assembly/NO_BIRD/5TYI.pdb data/bio_assembly/NO_BIRD/5TYI.pdb L
|
||||
data/bio_assembly/NO_BIRD/5UW5.pdb data/bio_assembly/NO_BIRD/5UW5.pdb E
|
||||
data/bio_assembly/NO_BIRD/5UW7.pdb data/bio_assembly/NO_BIRD/5UW7.pdb C
|
||||
data/bio_assembly/NO_BIRD/5K9S.pdb data/bio_assembly/NO_BIRD/5K9S.pdb B
|
||||
data/bio_assembly/NO_BIRD/5AFG.pdb data/bio_assembly/NO_BIRD/5AFG.pdb B
|
||||
data/bio_assembly/NO_BIRD/4QSY.pdb data/bio_assembly/NO_BIRD/4QSY.pdb B
|
||||
data/bio_assembly/NO_BIRD/5VLA.pdb data/bio_assembly/NO_BIRD/5VLA.pdb Z
|
||||
data/bio_assembly/NO_BIRD/5VTB.pdb data/bio_assembly/NO_BIRD/5VTB.pdb B
|
||||
data/bio_assembly/NO_BIRD/4O6W.pdb data/bio_assembly/NO_BIRD/4O6W.pdb C
|
||||
data/bio_assembly/NO_BIRD/4Y6L.pdb data/bio_assembly/NO_BIRD/4Y6L.pdb C
|
||||
data/bio_assembly/NO_BIRD/4Z2V.pdb data/bio_assembly/NO_BIRD/4Z2V.pdb C
|
||||
data/bio_assembly/NO_BIRD/2Z3L.pdb data/bio_assembly/NO_BIRD/2Z3L.pdb C
|
||||
data/bio_assembly/NO_BIRD/2Z3N.pdb data/bio_assembly/NO_BIRD/2Z3N.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X6S.pdb data/bio_assembly/NO_BIRD/4X6S.pdb L
|
||||
data/bio_assembly/NO_BIRD/4OKF.pdb data/bio_assembly/NO_BIRD/4OKF.pdb A
|
||||
data/bio_assembly/NO_BIRD/6HON.pdb data/bio_assembly/NO_BIRD/6HON.pdb B
|
||||
data/bio_assembly/NO_BIRD/6HOM.pdb data/bio_assembly/NO_BIRD/6HOM.pdb B
|
||||
data/bio_assembly/NO_BIRD/6HV2.pdb data/bio_assembly/NO_BIRD/6HV2.pdb B
|
||||
data/bio_assembly/NO_BIRD/5X7B.pdb data/bio_assembly/NO_BIRD/5X7B.pdb L
|
||||
data/bio_assembly/BIRD/2R9B.pdb data/bio_assembly/BIRD/2R9B.pdb C
|
||||
data/bio_assembly/BIRD/3URI.pdb data/bio_assembly/BIRD/3URI.pdb B
|
||||
data/bio_assembly/BIRD/3URL.pdb data/bio_assembly/BIRD/3URL.pdb B
|
||||
data/bio_assembly/BIRD/3V3B.pdb data/bio_assembly/BIRD/3V3B.pdb D
|
||||
data/bio_assembly/BIRD/3UQP.pdb data/bio_assembly/BIRD/3UQP.pdb B
|
||||
data/bio_assembly/BIRD/3UQR.pdb data/bio_assembly/BIRD/3UQR.pdb D
|
||||
data/bio_assembly/BIRD/5JXH.pdb data/bio_assembly/BIRD/5JXH.pdb H
|
||||
data/bio_assembly/BIRD/5JXJ.pdb data/bio_assembly/BIRD/5JXJ.pdb H
|
||||
data/bio_assembly/BIRD/4RCP.pdb data/bio_assembly/BIRD/4RCP.pdb B
|
||||
data/bio_assembly/BIRD/4TPG.pdb data/bio_assembly/BIRD/4TPG.pdb E
|
||||
data/bio_assembly/BIRD/4RYD.pdb data/bio_assembly/BIRD/4RYD.pdb H
|
||||
data/bio_assembly/BIRD/4O6W.pdb data/bio_assembly/BIRD/4O6W.pdb C
|
||||
data/bio_assembly/BIRD/4K1E.pdb data/bio_assembly/BIRD/4K1E.pdb B
|
||||
data/bio_assembly/BIRD/4DV9.pdb data/bio_assembly/BIRD/4DV9.pdb B
|
||||
data/bio_assembly/BIRD/4DVF.pdb data/bio_assembly/BIRD/4DVF.pdb C
|
||||
data/bio_assembly/BIRD/4EZP.pdb data/bio_assembly/BIRD/4EZP.pdb D
|
||||
data/bio_assembly/BIRD/4FBX.pdb data/bio_assembly/BIRD/4FBX.pdb B
|
||||
data/bio_assembly/BIRD/4G35.pdb data/bio_assembly/BIRD/4G35.pdb B
|
||||
data/bio_assembly/BIRD/5DNJ.pdb data/bio_assembly/BIRD/5DNJ.pdb B
|
||||
data/bio_assembly/BIRD/4WHH.pdb data/bio_assembly/BIRD/4WHH.pdb B
|
||||
data/bio_assembly/BIRD/4WHK.pdb data/bio_assembly/BIRD/4WHK.pdb B
|
||||
data/bio_assembly/BIRD/4WHL.pdb data/bio_assembly/BIRD/4WHL.pdb B
|
||||
data/bio_assembly/BIRD/1SFI.pdb data/bio_assembly/BIRD/1SFI.pdb I
|
||||
data/bio_assembly/BIRD/3RQ7.pdb data/bio_assembly/BIRD/3RQ7.pdb B
|
||||
data/bio_assembly/BIRD/3SNA.pdb data/bio_assembly/BIRD/3SNA.pdb H
|
||||
data/bio_assembly/BIRD/3SNB.pdb data/bio_assembly/BIRD/3SNB.pdb H
|
||||
data/bio_assembly/BIRD/3SNC.pdb data/bio_assembly/BIRD/3SNC.pdb H
|
||||
data/bio_assembly/BIRD/3SND.pdb data/bio_assembly/BIRD/3SND.pdb C
|
||||
data/bio_assembly/BIRD/3SNE.pdb data/bio_assembly/BIRD/3SNE.pdb H
|
||||
data/bio_assembly/BIRD/3S70.pdb data/bio_assembly/BIRD/3S70.pdb B
|
||||
data/bio_assembly/BIRD/1OKX.pdb data/bio_assembly/BIRD/1OKX.pdb C
|
||||
data/bio_assembly/BIRD/6VXY.pdb data/bio_assembly/BIRD/6VXY.pdb C
|
||||
data/bio_assembly/BIRD/3VFK.pdb data/bio_assembly/BIRD/3VFK.pdb G
|
||||
data/bio_assembly/BIRD/3VFJ.pdb data/bio_assembly/BIRD/3VFJ.pdb G
|
||||
data/bio_assembly/BIRD/2XAD.pdb data/bio_assembly/BIRD/2XAD.pdb E
|
||||
data/bio_assembly/BIRD/4MFL.pdb data/bio_assembly/BIRD/4MFL.pdb B
|
||||
data/bio_assembly/BIRD/4MFP.pdb data/bio_assembly/BIRD/4MFP.pdb B
|
||||
data/bio_assembly/BIRD/4MFQ.pdb data/bio_assembly/BIRD/4MFQ.pdb B
|
||||
data/bio_assembly/BIRD/4PJZ.pdb data/bio_assembly/BIRD/4PJZ.pdb B
|
||||
data/bio_assembly/BIRD/4PK0.pdb data/bio_assembly/BIRD/4PK0.pdb B
|
||||
data/bio_assembly/BIRD/4EEC.pdb data/bio_assembly/BIRD/4EEC.pdb C
|
||||
data/bio_assembly/BIRD/4JNA.pdb data/bio_assembly/BIRD/4JNA.pdb I
|
||||
data/bio_assembly/BIRD/4NEC.pdb data/bio_assembly/BIRD/4NEC.pdb E
|
||||
data/bio_assembly/BIRD/3AH8.pdb data/bio_assembly/BIRD/3AH8.pdb Y
|
||||
data/bio_assembly/BIRD/3RQD.pdb data/bio_assembly/BIRD/3RQD.pdb C
|
||||
data/bio_assembly/BIRD/2CV3.pdb data/bio_assembly/BIRD/2CV3.pdb B
|
||||
data/bio_assembly/BIRD/2RMC.pdb data/bio_assembly/BIRD/2RMC.pdb B
|
||||
data/bio_assembly/BIRD/4TOT.pdb data/bio_assembly/BIRD/4TOT.pdb E
|
||||
data/bio_assembly/BIRD/6O21.pdb data/bio_assembly/BIRD/6O21.pdb B
|
||||
data/bio_assembly/BIRD/6C1Q.pdb data/bio_assembly/BIRD/6C1Q.pdb L
|
||||
data/bio_assembly/BIRD/6C1R.pdb data/bio_assembly/BIRD/6C1R.pdb L
|
||||
data/bio_assembly/BIRD/1MF8.pdb data/bio_assembly/BIRD/1MF8.pdb D
|
||||
data/bio_assembly/BIRD/3WDC.pdb data/bio_assembly/BIRD/3WDC.pdb B
|
||||
data/bio_assembly/BIRD/3WDD.pdb data/bio_assembly/BIRD/3WDD.pdb B
|
||||
data/bio_assembly/BIRD/3WDE.pdb data/bio_assembly/BIRD/3WDE.pdb B
|
||||
data/bio_assembly/BIRD/3WMG.pdb data/bio_assembly/BIRD/3WMG.pdb B
|
||||
data/bio_assembly/BIRD/3WNE.pdb data/bio_assembly/BIRD/3WNE.pdb C
|
||||
data/bio_assembly/BIRD/3WNF.pdb data/bio_assembly/BIRD/3WNF.pdb C
|
||||
data/bio_assembly/BIRD/3WNG.pdb data/bio_assembly/BIRD/3WNG.pdb C
|
||||
data/bio_assembly/BIRD/2Z6W.pdb data/bio_assembly/BIRD/2Z6W.pdb M
|
||||
data/bio_assembly/BIRD/4MNW.pdb data/bio_assembly/BIRD/4MNW.pdb B
|
||||
data/bio_assembly/BIRD/4MNX.pdb data/bio_assembly/BIRD/4MNX.pdb B
|
||||
data/bio_assembly/BIRD/4MNY.pdb data/bio_assembly/BIRD/4MNY.pdb C
|
||||
data/bio_assembly/BIRD/4OS1.pdb data/bio_assembly/BIRD/4OS1.pdb B
|
||||
data/bio_assembly/BIRD/4OS2.pdb data/bio_assembly/BIRD/4OS2.pdb B
|
||||
data/bio_assembly/BIRD/4OS4.pdb data/bio_assembly/BIRD/4OS4.pdb B
|
||||
data/bio_assembly/BIRD/4OS5.pdb data/bio_assembly/BIRD/4OS5.pdb B
|
||||
data/bio_assembly/BIRD/4OS6.pdb data/bio_assembly/BIRD/4OS6.pdb B
|
||||
data/bio_assembly/BIRD/4OS7.pdb data/bio_assembly/BIRD/4OS7.pdb B
|
||||
data/bio_assembly/BIRD/4IPZ.pdb data/bio_assembly/BIRD/4IPZ.pdb B
|
||||
data/bio_assembly/BIRD/4JJM.pdb data/bio_assembly/BIRD/4JJM.pdb F
|
||||
data/bio_assembly/BIRD/4JK5.pdb data/bio_assembly/BIRD/4JK5.pdb B
|
||||
data/bio_assembly/BIRD/4JK6.pdb data/bio_assembly/BIRD/4JK6.pdb B
|
||||
data/bio_assembly/BIRD/4DGC.pdb data/bio_assembly/BIRD/4DGC.pdb F
|
||||
data/bio_assembly/BIRD/4GLY.pdb data/bio_assembly/BIRD/4GLY.pdb B
|
||||
data/bio_assembly/BIRD/4YV9.pdb data/bio_assembly/BIRD/4YV9.pdb E
|
||||
data/bio_assembly/BIRD/4ZJX.pdb data/bio_assembly/BIRD/4ZJX.pdb B
|
||||
data/bio_assembly/BIRD/4ZQW.pdb data/bio_assembly/BIRD/4ZQW.pdb A
|
||||
data/bio_assembly/BIRD/3BO7.pdb data/bio_assembly/BIRD/3BO7.pdb E
|
||||
data/bio_assembly/BIRD/3EOV.pdb data/bio_assembly/BIRD/3EOV.pdb C
|
||||
data/bio_assembly/BIRD/4GUX.pdb data/bio_assembly/BIRD/4GUX.pdb D
|
||||
data/bio_assembly/BIRD/4GVU.pdb data/bio_assembly/BIRD/4GVU.pdb B
|
||||
data/bio_assembly/BIRD/4HGC.pdb data/bio_assembly/BIRD/4HGC.pdb I
|
||||
data/bio_assembly/BIRD/4HY7.pdb data/bio_assembly/BIRD/4HY7.pdb B
|
||||
data/bio_assembly/BIRD/2WFJ.pdb data/bio_assembly/BIRD/2WFJ.pdb B
|
||||
data/bio_assembly/BIRD/2X7K.pdb data/bio_assembly/BIRD/2X7K.pdb B
|
||||
data/bio_assembly/BIRD/4KEL.pdb data/bio_assembly/BIRD/4KEL.pdb B
|
||||
data/bio_assembly/BIRD/4L3O.pdb data/bio_assembly/BIRD/4L3O.pdb E
|
||||
data/bio_assembly/BIRD/4KTU.pdb data/bio_assembly/BIRD/4KTU.pdb B
|
||||
data/bio_assembly/BIRD/4KTS.pdb data/bio_assembly/BIRD/4KTS.pdb B
|
||||
data/bio_assembly/BIRD/4KTC.pdb data/bio_assembly/BIRD/4KTC.pdb B
|
||||
data/bio_assembly/BIRD/3AVA.pdb data/bio_assembly/BIRD/3AVA.pdb X
|
||||
data/bio_assembly/BIRD/3AVB.pdb data/bio_assembly/BIRD/3AVB.pdb X
|
||||
data/bio_assembly/BIRD/3AV9.pdb data/bio_assembly/BIRD/3AV9.pdb X
|
||||
data/bio_assembly/BIRD/3AVI.pdb data/bio_assembly/BIRD/3AVI.pdb D
|
||||
data/bio_assembly/BIRD/3AVJ.pdb data/bio_assembly/BIRD/3AVJ.pdb D
|
||||
data/bio_assembly/BIRD/3AVK.pdb data/bio_assembly/BIRD/3AVK.pdb D
|
||||
data/bio_assembly/BIRD/3AVL.pdb data/bio_assembly/BIRD/3AVL.pdb E
|
||||
data/bio_assembly/BIRD/3AVM.pdb data/bio_assembly/BIRD/3AVM.pdb D
|
||||
data/bio_assembly/BIRD/3AVN.pdb data/bio_assembly/BIRD/3AVN.pdb G
|
||||
data/bio_assembly/BIRD/5XN3.pdb data/bio_assembly/BIRD/5XN3.pdb B
|
||||
data/bio_assembly/BIRD/6CN8.pdb data/bio_assembly/BIRD/6CN8.pdb B
|
||||
data/bio_assembly/BIRD/6DN8.pdb data/bio_assembly/BIRD/6DN8.pdb B
|
||||
data/bio_assembly/BIRD/6DN5.pdb data/bio_assembly/BIRD/6DN5.pdb B
|
||||
data/bio_assembly/BIRD/6DN7.pdb data/bio_assembly/BIRD/6DN7.pdb D
|
||||
data/bio_assembly/BIRD/6DN6.pdb data/bio_assembly/BIRD/6DN6.pdb B
|
||||
data/bio_assembly/BIRD/5VI6.pdb data/bio_assembly/BIRD/5VI6.pdb B
|
||||
data/bio_assembly/BIRD/4WVT.pdb data/bio_assembly/BIRD/4WVT.pdb C
|
||||
data/bio_assembly/BIRD/4WVU.pdb data/bio_assembly/BIRD/4WVU.pdb B
|
||||
data/bio_assembly/BIRD/2POY.pdb data/bio_assembly/BIRD/2POY.pdb T
|
||||
data/bio_assembly/BIRD/2OJU.pdb data/bio_assembly/BIRD/2OJU.pdb D
|
||||
data/bio_assembly/BIRD/1BCK.pdb data/bio_assembly/BIRD/1BCK.pdb C
|
||||
data/bio_assembly/BIRD/1CWC.pdb data/bio_assembly/BIRD/1CWC.pdb C
|
||||
data/bio_assembly/BIRD/1CWB.pdb data/bio_assembly/BIRD/1CWB.pdb C
|
||||
data/bio_assembly/BIRD/1CWA.pdb data/bio_assembly/BIRD/1CWA.pdb C
|
||||
data/bio_assembly/BIRD/1CYN.pdb data/bio_assembly/BIRD/1CYN.pdb C
|
||||
data/bio_assembly/BIRD/1IKF.pdb data/bio_assembly/BIRD/1IKF.pdb C
|
||||
data/bio_assembly/BIRD/6J67.pdb data/bio_assembly/BIRD/6J67.pdb C
|
||||
data/bio_assembly/BIRD/3PMP.pdb data/bio_assembly/BIRD/3PMP.pdb C
|
||||
data/bio_assembly/BIRD/1MIK.pdb data/bio_assembly/BIRD/1MIK.pdb B
|
||||
data/bio_assembly/BIRD/1QNH.pdb data/bio_assembly/BIRD/1QNH.pdb C
|
||||
data/bio_assembly/BIRD/1QNG.pdb data/bio_assembly/BIRD/1QNG.pdb D
|
||||
data/bio_assembly/BIRD/1TK2.pdb data/bio_assembly/BIRD/1TK2.pdb B
|
||||
data/bio_assembly/BIRD/1TMB.pdb data/bio_assembly/BIRD/1TMB.pdb T
|
||||
data/bio_assembly/BIRD/1W9U.pdb data/bio_assembly/BIRD/1W9U.pdb C
|
||||
data/bio_assembly/BIRD/1WAW.pdb data/bio_assembly/BIRD/1WAW.pdb B
|
||||
data/bio_assembly/BIRD/1XQ7.pdb data/bio_assembly/BIRD/1XQ7.pdb D
|
||||
data/bio_assembly/BIRD/2BCD.pdb data/bio_assembly/BIRD/2BCD.pdb B
|
||||
data/bio_assembly/BIRD/3SM1.pdb data/bio_assembly/BIRD/3SM1.pdb J
|
||||
data/bio_assembly/BIRD/6DNO.pdb data/bio_assembly/BIRD/6DNO.pdb C
|
||||
data/bio_assembly/BIRD/6DTN.pdb data/bio_assembly/BIRD/6DTN.pdb A
|
||||
data/bio_assembly/BIRD/6M9D.pdb data/bio_assembly/BIRD/6M9D.pdb B
|
||||
data/bio_assembly/BIRD/6APR.pdb data/bio_assembly/BIRD/6APR.pdb I
|
||||
data/bio_assembly/BIRD/6V2D.pdb data/bio_assembly/BIRD/6V2D.pdb B
|
||||
data/bio_assembly/BIRD/6V2S.pdb data/bio_assembly/BIRD/6V2S.pdb C
|
||||
data/bio_assembly/BIRD/6V2R.pdb data/bio_assembly/BIRD/6V2R.pdb B
|
||||
data/bio_assembly/BIRD/5U66.pdb data/bio_assembly/BIRD/5U66.pdb B
|
||||
data/bio_assembly/BIRD/1M21.pdb data/bio_assembly/BIRD/1M21.pdb C
|
||||
data/bio_assembly/BIRD/1LS5.pdb data/bio_assembly/BIRD/1LS5.pdb C
|
||||
data/bio_assembly/BIRD/1M43.pdb data/bio_assembly/BIRD/1M43.pdb C
|
||||
data/bio_assembly/BIRD/2CF9.pdb data/bio_assembly/BIRD/2CF9.pdb I
|
||||
data/bio_assembly/BIRD/2CF8.pdb data/bio_assembly/BIRD/2CF8.pdb I
|
||||
data/bio_assembly/BIRD/2CN0.pdb data/bio_assembly/BIRD/2CN0.pdb I
|
||||
data/bio_assembly/BIRD/2F9N.pdb data/bio_assembly/BIRD/2F9N.pdb E
|
||||
data/bio_assembly/BIRD/2F9P.pdb data/bio_assembly/BIRD/2F9P.pdb E
|
||||
data/bio_assembly/BIRD/2FES.pdb data/bio_assembly/BIRD/2FES.pdb D
|
||||
data/bio_assembly/BIRD/2FEQ.pdb data/bio_assembly/BIRD/2FEQ.pdb D
|
||||
data/bio_assembly/BIRD/1APU.pdb data/bio_assembly/BIRD/1APU.pdb I
|
||||
data/bio_assembly/BIRD/1AQ7.pdb data/bio_assembly/BIRD/1AQ7.pdb B
|
||||
data/bio_assembly/BIRD/1O0D.pdb data/bio_assembly/BIRD/1O0D.pdb D
|
||||
data/bio_assembly/BIRD/2AGI.pdb data/bio_assembly/BIRD/2AGI.pdb A
|
||||
data/bio_assembly/BIRD/2ANK.pdb data/bio_assembly/BIRD/2ANK.pdb P
|
||||
data/bio_assembly/BIRD/1WB0.pdb data/bio_assembly/BIRD/1WB0.pdb B
|
||||
data/bio_assembly/BIRD/1W9V.pdb data/bio_assembly/BIRD/1W9V.pdb C
|
||||
data/bio_assembly/BIRD/1W6I.pdb data/bio_assembly/BIRD/1W6I.pdb B
|
||||
data/bio_assembly/BIRD/1QS8.pdb data/bio_assembly/BIRD/1QS8.pdb C
|
||||
data/bio_assembly/BIRD/1PSO.pdb data/bio_assembly/BIRD/1PSO.pdb I
|
||||
data/bio_assembly/BIRD/1POP.pdb data/bio_assembly/BIRD/1POP.pdb B
|
||||
data/bio_assembly/BIRD/1OYT.pdb data/bio_assembly/BIRD/1OYT.pdb I
|
||||
data/bio_assembly/BIRD/1NZQ.pdb data/bio_assembly/BIRD/1NZQ.pdb D
|
||||
data/bio_assembly/BIRD/1WVM.pdb data/bio_assembly/BIRD/1WVM.pdb C
|
||||
data/bio_assembly/BIRD/1XDH.pdb data/bio_assembly/BIRD/1XDH.pdb C
|
||||
data/bio_assembly/BIRD/1WKR.pdb data/bio_assembly/BIRD/1WKR.pdb I
|
||||
data/bio_assembly/BIRD/1BCS.pdb data/bio_assembly/BIRD/1BCS.pdb C
|
||||
data/bio_assembly/BIRD/1BCR.pdb data/bio_assembly/BIRD/1BCR.pdb C
|
||||
data/bio_assembly/BIRD/6OBR.pdb data/bio_assembly/BIRD/6OBR.pdb D
|
||||
data/bio_assembly/BIRD/6OBQ.pdb data/bio_assembly/BIRD/6OBQ.pdb C
|
||||
data/bio_assembly/BIRD/6OBU.pdb data/bio_assembly/BIRD/6OBU.pdb C
|
||||
data/bio_assembly/BIRD/1H0I.pdb data/bio_assembly/BIRD/1H0I.pdb C
|
||||
data/bio_assembly/BIRD/6XA4.pdb data/bio_assembly/BIRD/6XA4.pdb B
|
||||
data/bio_assembly/BIRD/6YZ6.pdb data/bio_assembly/BIRD/6YZ6.pdb C
|
||||
data/bio_assembly/BIRD/1FJM.pdb data/bio_assembly/BIRD/1FJM.pdb M
|
||||
data/bio_assembly/BIRD/6BKJ.pdb data/bio_assembly/BIRD/6BKJ.pdb F
|
||||
data/bio_assembly/BIRD/5WGQ.pdb data/bio_assembly/BIRD/5WGQ.pdb E
|
||||
data/bio_assembly/BIRD/4IMQ.pdb data/bio_assembly/BIRD/4IMQ.pdb B
|
||||
data/bio_assembly/BIRD/4INH.pdb data/bio_assembly/BIRD/4INH.pdb M
|
||||
data/bio_assembly/BIRD/4IMZ.pdb data/bio_assembly/BIRD/4IMZ.pdb B
|
||||
data/bio_assembly/BIRD/1TL9.pdb data/bio_assembly/BIRD/1TL9.pdb B
|
||||
data/bio_assembly/BIRD/1SGC.pdb data/bio_assembly/BIRD/1SGC.pdb B
|
||||
data/bio_assembly/BIRD/1IZE.pdb data/bio_assembly/BIRD/1IZE.pdb B
|
||||
data/bio_assembly/BIRD/1JRT.pdb data/bio_assembly/BIRD/1JRT.pdb B
|
||||
data/bio_assembly/BIRD/1JRS.pdb data/bio_assembly/BIRD/1JRS.pdb B
|
||||
data/bio_assembly/BIRD/4Y9W.pdb data/bio_assembly/BIRD/4Y9W.pdb B
|
||||
data/bio_assembly/BIRD/4NMT.pdb data/bio_assembly/BIRD/4NMT.pdb C
|
||||
data/bio_assembly/BIRD/4NMS.pdb data/bio_assembly/BIRD/4NMS.pdb C
|
||||
data/bio_assembly/BIRD/4NMR.pdb data/bio_assembly/BIRD/4NMR.pdb C
|
||||
data/bio_assembly/BIRD/4NMQ.pdb data/bio_assembly/BIRD/4NMQ.pdb C
|
||||
data/bio_assembly/BIRD/4NMP.pdb data/bio_assembly/BIRD/4NMP.pdb C
|
||||
data/bio_assembly/BIRD/4NMO.pdb data/bio_assembly/BIRD/4NMO.pdb C
|
||||
data/bio_assembly/BIRD/4MZJ.pdb data/bio_assembly/BIRD/4MZJ.pdb T
|
||||
data/bio_assembly/BIRD/3P72.pdb data/bio_assembly/BIRD/3P72.pdb B
|
||||
data/bio_assembly/BIRD/3OE0.pdb data/bio_assembly/BIRD/3OE0.pdb I
|
||||
data/bio_assembly/BIRD/4I7D.pdb data/bio_assembly/BIRD/4I7D.pdb B
|
||||
data/bio_assembly/BIRD/4I7C.pdb data/bio_assembly/BIRD/4I7C.pdb B
|
||||
data/bio_assembly/BIRD/4I7B.pdb data/bio_assembly/BIRD/4I7B.pdb B
|
||||
data/bio_assembly/BIRD/4I5N.pdb data/bio_assembly/BIRD/4I5N.pdb G
|
||||
data/bio_assembly/BIRD/4I5L.pdb data/bio_assembly/BIRD/4I5L.pdb G
|
||||
data/bio_assembly/BIRD/2P0R.pdb data/bio_assembly/BIRD/2P0R.pdb D
|
||||
data/bio_assembly/BIRD/2NYL.pdb data/bio_assembly/BIRD/2NYL.pdb G
|
||||
data/bio_assembly/BIRD/2NYM.pdb data/bio_assembly/BIRD/2NYM.pdb G
|
||||
data/bio_assembly/BIRD/2NQA.pdb data/bio_assembly/BIRD/2NQA.pdb D
|
||||
data/bio_assembly/BIRD/2NPP.pdb data/bio_assembly/BIRD/2NPP.pdb Y
|
||||
data/bio_assembly/BIRD/2QZX.pdb data/bio_assembly/BIRD/2QZX.pdb C
|
||||
data/bio_assembly/BIRD/2RMP.pdb data/bio_assembly/BIRD/2RMP.pdb B
|
||||
data/bio_assembly/BIRD/2PSX.pdb data/bio_assembly/BIRD/2PSX.pdb B
|
||||
data/bio_assembly/BIRD/2PSY.pdb data/bio_assembly/BIRD/2PSY.pdb B
|
||||
data/bio_assembly/BIRD/4ER2.pdb data/bio_assembly/BIRD/4ER2.pdb I
|
||||
data/bio_assembly/BIRD/4NMV.pdb data/bio_assembly/BIRD/4NMV.pdb C
|
||||
data/bio_assembly/BIRD/4EJK.pdb data/bio_assembly/BIRD/4EJK.pdb N
|
||||
data/bio_assembly/BIRD/4EJD.pdb data/bio_assembly/BIRD/4EJD.pdb C
|
||||
data/bio_assembly/BIRD/4EXH.pdb data/bio_assembly/BIRD/4EXH.pdb J
|
||||
data/bio_assembly/BIRD/4G5G.pdb data/bio_assembly/BIRD/4G5G.pdb I
|
||||
data/bio_assembly/BIRD/4BP9.pdb data/bio_assembly/BIRD/4BP9.pdb G
|
||||
data/bio_assembly/BIRD/3V4L.pdb data/bio_assembly/BIRD/3V4L.pdb B
|
||||
data/bio_assembly/BIRD/3V4O.pdb data/bio_assembly/BIRD/3V4O.pdb B
|
||||
data/bio_assembly/BIRD/3UOA.pdb data/bio_assembly/BIRD/3UOA.pdb L
|
||||
data/bio_assembly/BIRD/3UO8.pdb data/bio_assembly/BIRD/3UO8.pdb L
|
||||
data/bio_assembly/BIRD/3BPM.pdb data/bio_assembly/BIRD/3BPM.pdb D
|
||||
data/bio_assembly/BIRD/5LW1.pdb data/bio_assembly/BIRD/5LW1.pdb C
|
||||
data/bio_assembly/BIRD/5MS4.pdb data/bio_assembly/BIRD/5MS4.pdb E
|
||||
data/bio_assembly/BIRD/5K99.pdb data/bio_assembly/BIRD/5K99.pdb C
|
||||
data/bio_assembly/BIRD/5JPF.pdb data/bio_assembly/BIRD/5JPF.pdb M
|
||||
data/bio_assembly/BIRD/5N7Q.pdb data/bio_assembly/BIRD/5N7Q.pdb I
|
||||
data/bio_assembly/BIRD/5I70.pdb data/bio_assembly/BIRD/5I70.pdb D
|
||||
data/bio_assembly/BIRD/5HVP.pdb data/bio_assembly/BIRD/5HVP.pdb C
|
||||
data/bio_assembly/BIRD/5FC3.pdb data/bio_assembly/BIRD/5FC3.pdb A
|
||||
data/bio_assembly/BIRD/5FC2.pdb data/bio_assembly/BIRD/5FC2.pdb A
|
||||
data/bio_assembly/BIRD/5EPK.pdb data/bio_assembly/BIRD/5EPK.pdb B
|
||||
data/bio_assembly/BIRD/5EPJ.pdb data/bio_assembly/BIRD/5EPJ.pdb B
|
||||
data/bio_assembly/BIRD/5EQ0.pdb data/bio_assembly/BIRD/5EQ0.pdb B
|
||||
data/bio_assembly/BIRD/2XE4.pdb data/bio_assembly/BIRD/2XE4.pdb B
|
||||
data/bio_assembly/BIRD/2Z2P.pdb data/bio_assembly/BIRD/2Z2P.pdb C
|
||||
data/bio_assembly/BIRD/3E7A.pdb data/bio_assembly/BIRD/3E7A.pdb C
|
||||
data/bio_assembly/BIRD/3DW8.pdb data/bio_assembly/BIRD/3DW8.pdb G
|
||||
data/bio_assembly/BIRD/3EGH.pdb data/bio_assembly/BIRD/3EGH.pdb E
|
||||
data/bio_assembly/BIRD/3EMY.pdb data/bio_assembly/BIRD/3EMY.pdb B
|
||||
data/bio_assembly/BIRD/3MGB.pdb data/bio_assembly/BIRD/3MGB.pdb C
|
||||
data/bio_assembly/BIRD/3MG9.pdb data/bio_assembly/BIRD/3MG9.pdb B
|
||||
data/bio_assembly/BIRD/3FGA.pdb data/bio_assembly/BIRD/3FGA.pdb E
|
||||
data/bio_assembly/BIRD/3FNT.pdb data/bio_assembly/BIRD/3FNT.pdb I
|
||||
data/bio_assembly/BIRD/3FV3.pdb data/bio_assembly/BIRD/3FV3.pdb J
|
||||
data/bio_assembly/BIRD/2V3H.pdb data/bio_assembly/BIRD/2V3H.pdb I
|
||||
data/bio_assembly/BIRD/2V3O.pdb data/bio_assembly/BIRD/2V3O.pdb I
|
||||
data/bio_assembly/BIRD/4YV8.pdb data/bio_assembly/BIRD/4YV8.pdb B
|
||||
data/bio_assembly/BIRD/3Q4K.pdb data/bio_assembly/BIRD/3Q4K.pdb C
|
||||
data/bio_assembly/BIRD/3Q4L.pdb data/bio_assembly/BIRD/3Q4L.pdb C
|
||||
data/bio_assembly/BIRD/4TVG.pdb data/bio_assembly/BIRD/4TVG.pdb C
|
||||
data/bio_assembly/BIRD/5D13.pdb data/bio_assembly/BIRD/5D13.pdb E
|
||||
data/bio_assembly/BIRD/1A2C.pdb data/bio_assembly/BIRD/1A2C.pdb I
|
||||
data/bio_assembly/BIRD/2IAE.pdb data/bio_assembly/BIRD/2IAE.pdb M
|
||||
data/bio_assembly/BIRD/2IE3.pdb data/bio_assembly/BIRD/2IE3.pdb I
|
||||
data/bio_assembly/BIRD/2H6T.pdb data/bio_assembly/BIRD/2H6T.pdb B
|
||||
data/bio_assembly/BIRD/2FO5.pdb data/bio_assembly/BIRD/2FO5.pdb E
|
||||
253
data/bird_test.txt
Normal file
253
data/bird_test.txt
Normal file
@@ -0,0 +1,253 @@
|
||||
data/bio_assembly/BIRD/2R9B.pdb data/bio_assembly/BIRD/2R9B.pdb C
|
||||
data/bio_assembly/BIRD/3URI.pdb data/bio_assembly/BIRD/3URI.pdb B
|
||||
data/bio_assembly/BIRD/3URL.pdb data/bio_assembly/BIRD/3URL.pdb B
|
||||
data/bio_assembly/BIRD/3V3B.pdb data/bio_assembly/BIRD/3V3B.pdb D
|
||||
data/bio_assembly/BIRD/3UQP.pdb data/bio_assembly/BIRD/3UQP.pdb B
|
||||
data/bio_assembly/BIRD/3UQR.pdb data/bio_assembly/BIRD/3UQR.pdb D
|
||||
data/bio_assembly/BIRD/5JXH.pdb data/bio_assembly/BIRD/5JXH.pdb H
|
||||
data/bio_assembly/BIRD/5JXJ.pdb data/bio_assembly/BIRD/5JXJ.pdb H
|
||||
data/bio_assembly/BIRD/4RCP.pdb data/bio_assembly/BIRD/4RCP.pdb B
|
||||
data/bio_assembly/BIRD/4TPG.pdb data/bio_assembly/BIRD/4TPG.pdb E
|
||||
data/bio_assembly/BIRD/4RYD.pdb data/bio_assembly/BIRD/4RYD.pdb H
|
||||
data/bio_assembly/BIRD/4O6W.pdb data/bio_assembly/BIRD/4O6W.pdb C
|
||||
data/bio_assembly/BIRD/4K1E.pdb data/bio_assembly/BIRD/4K1E.pdb B
|
||||
data/bio_assembly/BIRD/4DV9.pdb data/bio_assembly/BIRD/4DV9.pdb B
|
||||
data/bio_assembly/BIRD/4DVF.pdb data/bio_assembly/BIRD/4DVF.pdb C
|
||||
data/bio_assembly/BIRD/4EZP.pdb data/bio_assembly/BIRD/4EZP.pdb D
|
||||
data/bio_assembly/BIRD/4FBX.pdb data/bio_assembly/BIRD/4FBX.pdb B
|
||||
data/bio_assembly/BIRD/4G35.pdb data/bio_assembly/BIRD/4G35.pdb B
|
||||
data/bio_assembly/BIRD/5DNJ.pdb data/bio_assembly/BIRD/5DNJ.pdb B
|
||||
data/bio_assembly/BIRD/4WHH.pdb data/bio_assembly/BIRD/4WHH.pdb B
|
||||
data/bio_assembly/BIRD/4WHK.pdb data/bio_assembly/BIRD/4WHK.pdb B
|
||||
data/bio_assembly/BIRD/4WHL.pdb data/bio_assembly/BIRD/4WHL.pdb B
|
||||
data/bio_assembly/BIRD/1SFI.pdb data/bio_assembly/BIRD/1SFI.pdb I
|
||||
data/bio_assembly/BIRD/3RQ7.pdb data/bio_assembly/BIRD/3RQ7.pdb B
|
||||
data/bio_assembly/BIRD/3SNA.pdb data/bio_assembly/BIRD/3SNA.pdb H
|
||||
data/bio_assembly/BIRD/3SNB.pdb data/bio_assembly/BIRD/3SNB.pdb H
|
||||
data/bio_assembly/BIRD/3SNC.pdb data/bio_assembly/BIRD/3SNC.pdb H
|
||||
data/bio_assembly/BIRD/3SND.pdb data/bio_assembly/BIRD/3SND.pdb C
|
||||
data/bio_assembly/BIRD/3SNE.pdb data/bio_assembly/BIRD/3SNE.pdb H
|
||||
data/bio_assembly/BIRD/3S70.pdb data/bio_assembly/BIRD/3S70.pdb B
|
||||
data/bio_assembly/BIRD/1OKX.pdb data/bio_assembly/BIRD/1OKX.pdb C
|
||||
data/bio_assembly/BIRD/6VXY.pdb data/bio_assembly/BIRD/6VXY.pdb C
|
||||
data/bio_assembly/BIRD/3VFK.pdb data/bio_assembly/BIRD/3VFK.pdb G
|
||||
data/bio_assembly/BIRD/3VFJ.pdb data/bio_assembly/BIRD/3VFJ.pdb G
|
||||
data/bio_assembly/BIRD/2XAD.pdb data/bio_assembly/BIRD/2XAD.pdb E
|
||||
data/bio_assembly/BIRD/4MFL.pdb data/bio_assembly/BIRD/4MFL.pdb B
|
||||
data/bio_assembly/BIRD/4MFP.pdb data/bio_assembly/BIRD/4MFP.pdb B
|
||||
data/bio_assembly/BIRD/4MFQ.pdb data/bio_assembly/BIRD/4MFQ.pdb B
|
||||
data/bio_assembly/BIRD/4PJZ.pdb data/bio_assembly/BIRD/4PJZ.pdb B
|
||||
data/bio_assembly/BIRD/4PK0.pdb data/bio_assembly/BIRD/4PK0.pdb B
|
||||
data/bio_assembly/BIRD/4EEC.pdb data/bio_assembly/BIRD/4EEC.pdb C
|
||||
data/bio_assembly/BIRD/4JNA.pdb data/bio_assembly/BIRD/4JNA.pdb I
|
||||
data/bio_assembly/BIRD/4NEC.pdb data/bio_assembly/BIRD/4NEC.pdb E
|
||||
data/bio_assembly/BIRD/3AH8.pdb data/bio_assembly/BIRD/3AH8.pdb Y
|
||||
data/bio_assembly/BIRD/3RQD.pdb data/bio_assembly/BIRD/3RQD.pdb C
|
||||
data/bio_assembly/BIRD/2CV3.pdb data/bio_assembly/BIRD/2CV3.pdb B
|
||||
data/bio_assembly/BIRD/2RMC.pdb data/bio_assembly/BIRD/2RMC.pdb B
|
||||
data/bio_assembly/BIRD/4TOT.pdb data/bio_assembly/BIRD/4TOT.pdb E
|
||||
data/bio_assembly/BIRD/6O21.pdb data/bio_assembly/BIRD/6O21.pdb B
|
||||
data/bio_assembly/BIRD/6C1Q.pdb data/bio_assembly/BIRD/6C1Q.pdb L
|
||||
data/bio_assembly/BIRD/6C1R.pdb data/bio_assembly/BIRD/6C1R.pdb L
|
||||
data/bio_assembly/BIRD/1MF8.pdb data/bio_assembly/BIRD/1MF8.pdb D
|
||||
data/bio_assembly/BIRD/3WDC.pdb data/bio_assembly/BIRD/3WDC.pdb B
|
||||
data/bio_assembly/BIRD/3WDD.pdb data/bio_assembly/BIRD/3WDD.pdb B
|
||||
data/bio_assembly/BIRD/3WDE.pdb data/bio_assembly/BIRD/3WDE.pdb B
|
||||
data/bio_assembly/BIRD/3WMG.pdb data/bio_assembly/BIRD/3WMG.pdb B
|
||||
data/bio_assembly/BIRD/3WNE.pdb data/bio_assembly/BIRD/3WNE.pdb C
|
||||
data/bio_assembly/BIRD/3WNF.pdb data/bio_assembly/BIRD/3WNF.pdb C
|
||||
data/bio_assembly/BIRD/3WNG.pdb data/bio_assembly/BIRD/3WNG.pdb C
|
||||
data/bio_assembly/BIRD/2Z6W.pdb data/bio_assembly/BIRD/2Z6W.pdb M
|
||||
data/bio_assembly/BIRD/4MNW.pdb data/bio_assembly/BIRD/4MNW.pdb B
|
||||
data/bio_assembly/BIRD/4MNX.pdb data/bio_assembly/BIRD/4MNX.pdb B
|
||||
data/bio_assembly/BIRD/4MNY.pdb data/bio_assembly/BIRD/4MNY.pdb C
|
||||
data/bio_assembly/BIRD/4OS1.pdb data/bio_assembly/BIRD/4OS1.pdb B
|
||||
data/bio_assembly/BIRD/4OS2.pdb data/bio_assembly/BIRD/4OS2.pdb B
|
||||
data/bio_assembly/BIRD/4OS4.pdb data/bio_assembly/BIRD/4OS4.pdb B
|
||||
data/bio_assembly/BIRD/4OS5.pdb data/bio_assembly/BIRD/4OS5.pdb B
|
||||
data/bio_assembly/BIRD/4OS6.pdb data/bio_assembly/BIRD/4OS6.pdb B
|
||||
data/bio_assembly/BIRD/4OS7.pdb data/bio_assembly/BIRD/4OS7.pdb B
|
||||
data/bio_assembly/BIRD/4IPZ.pdb data/bio_assembly/BIRD/4IPZ.pdb B
|
||||
data/bio_assembly/BIRD/4JJM.pdb data/bio_assembly/BIRD/4JJM.pdb F
|
||||
data/bio_assembly/BIRD/4JK5.pdb data/bio_assembly/BIRD/4JK5.pdb B
|
||||
data/bio_assembly/BIRD/4JK6.pdb data/bio_assembly/BIRD/4JK6.pdb B
|
||||
data/bio_assembly/BIRD/4DGC.pdb data/bio_assembly/BIRD/4DGC.pdb F
|
||||
data/bio_assembly/BIRD/4GLY.pdb data/bio_assembly/BIRD/4GLY.pdb B
|
||||
data/bio_assembly/BIRD/4YV9.pdb data/bio_assembly/BIRD/4YV9.pdb E
|
||||
data/bio_assembly/BIRD/4ZJX.pdb data/bio_assembly/BIRD/4ZJX.pdb B
|
||||
data/bio_assembly/BIRD/4ZQW.pdb data/bio_assembly/BIRD/4ZQW.pdb A
|
||||
data/bio_assembly/BIRD/3BO7.pdb data/bio_assembly/BIRD/3BO7.pdb E
|
||||
data/bio_assembly/BIRD/3EOV.pdb data/bio_assembly/BIRD/3EOV.pdb C
|
||||
data/bio_assembly/BIRD/4GUX.pdb data/bio_assembly/BIRD/4GUX.pdb D
|
||||
data/bio_assembly/BIRD/4GVU.pdb data/bio_assembly/BIRD/4GVU.pdb B
|
||||
data/bio_assembly/BIRD/4HGC.pdb data/bio_assembly/BIRD/4HGC.pdb I
|
||||
data/bio_assembly/BIRD/4HY7.pdb data/bio_assembly/BIRD/4HY7.pdb B
|
||||
data/bio_assembly/BIRD/2WFJ.pdb data/bio_assembly/BIRD/2WFJ.pdb B
|
||||
data/bio_assembly/BIRD/2X7K.pdb data/bio_assembly/BIRD/2X7K.pdb B
|
||||
data/bio_assembly/BIRD/4KEL.pdb data/bio_assembly/BIRD/4KEL.pdb B
|
||||
data/bio_assembly/BIRD/4L3O.pdb data/bio_assembly/BIRD/4L3O.pdb E
|
||||
data/bio_assembly/BIRD/4KTU.pdb data/bio_assembly/BIRD/4KTU.pdb B
|
||||
data/bio_assembly/BIRD/4KTS.pdb data/bio_assembly/BIRD/4KTS.pdb B
|
||||
data/bio_assembly/BIRD/4KTC.pdb data/bio_assembly/BIRD/4KTC.pdb B
|
||||
data/bio_assembly/BIRD/3AVA.pdb data/bio_assembly/BIRD/3AVA.pdb X
|
||||
data/bio_assembly/BIRD/3AVB.pdb data/bio_assembly/BIRD/3AVB.pdb X
|
||||
data/bio_assembly/BIRD/3AV9.pdb data/bio_assembly/BIRD/3AV9.pdb X
|
||||
data/bio_assembly/BIRD/3AVI.pdb data/bio_assembly/BIRD/3AVI.pdb D
|
||||
data/bio_assembly/BIRD/3AVJ.pdb data/bio_assembly/BIRD/3AVJ.pdb D
|
||||
data/bio_assembly/BIRD/3AVK.pdb data/bio_assembly/BIRD/3AVK.pdb D
|
||||
data/bio_assembly/BIRD/3AVL.pdb data/bio_assembly/BIRD/3AVL.pdb E
|
||||
data/bio_assembly/BIRD/3AVM.pdb data/bio_assembly/BIRD/3AVM.pdb D
|
||||
data/bio_assembly/BIRD/3AVN.pdb data/bio_assembly/BIRD/3AVN.pdb G
|
||||
data/bio_assembly/BIRD/5XN3.pdb data/bio_assembly/BIRD/5XN3.pdb B
|
||||
data/bio_assembly/BIRD/6CN8.pdb data/bio_assembly/BIRD/6CN8.pdb B
|
||||
data/bio_assembly/BIRD/6DN8.pdb data/bio_assembly/BIRD/6DN8.pdb B
|
||||
data/bio_assembly/BIRD/6DN5.pdb data/bio_assembly/BIRD/6DN5.pdb B
|
||||
data/bio_assembly/BIRD/6DN7.pdb data/bio_assembly/BIRD/6DN7.pdb D
|
||||
data/bio_assembly/BIRD/6DN6.pdb data/bio_assembly/BIRD/6DN6.pdb B
|
||||
data/bio_assembly/BIRD/5VI6.pdb data/bio_assembly/BIRD/5VI6.pdb B
|
||||
data/bio_assembly/BIRD/4WVT.pdb data/bio_assembly/BIRD/4WVT.pdb C
|
||||
data/bio_assembly/BIRD/4WVU.pdb data/bio_assembly/BIRD/4WVU.pdb B
|
||||
data/bio_assembly/BIRD/2POY.pdb data/bio_assembly/BIRD/2POY.pdb T
|
||||
data/bio_assembly/BIRD/2OJU.pdb data/bio_assembly/BIRD/2OJU.pdb D
|
||||
data/bio_assembly/BIRD/1BCK.pdb data/bio_assembly/BIRD/1BCK.pdb C
|
||||
data/bio_assembly/BIRD/1CWC.pdb data/bio_assembly/BIRD/1CWC.pdb C
|
||||
data/bio_assembly/BIRD/1CWB.pdb data/bio_assembly/BIRD/1CWB.pdb C
|
||||
data/bio_assembly/BIRD/1CWA.pdb data/bio_assembly/BIRD/1CWA.pdb C
|
||||
data/bio_assembly/BIRD/1CYN.pdb data/bio_assembly/BIRD/1CYN.pdb C
|
||||
data/bio_assembly/BIRD/1IKF.pdb data/bio_assembly/BIRD/1IKF.pdb C
|
||||
data/bio_assembly/BIRD/6J67.pdb data/bio_assembly/BIRD/6J67.pdb C
|
||||
data/bio_assembly/BIRD/3PMP.pdb data/bio_assembly/BIRD/3PMP.pdb C
|
||||
data/bio_assembly/BIRD/1MIK.pdb data/bio_assembly/BIRD/1MIK.pdb B
|
||||
data/bio_assembly/BIRD/1QNH.pdb data/bio_assembly/BIRD/1QNH.pdb C
|
||||
data/bio_assembly/BIRD/1QNG.pdb data/bio_assembly/BIRD/1QNG.pdb D
|
||||
data/bio_assembly/BIRD/1TK2.pdb data/bio_assembly/BIRD/1TK2.pdb B
|
||||
data/bio_assembly/BIRD/1TMB.pdb data/bio_assembly/BIRD/1TMB.pdb T
|
||||
data/bio_assembly/BIRD/1W9U.pdb data/bio_assembly/BIRD/1W9U.pdb C
|
||||
data/bio_assembly/BIRD/1WAW.pdb data/bio_assembly/BIRD/1WAW.pdb B
|
||||
data/bio_assembly/BIRD/1XQ7.pdb data/bio_assembly/BIRD/1XQ7.pdb D
|
||||
data/bio_assembly/BIRD/2BCD.pdb data/bio_assembly/BIRD/2BCD.pdb B
|
||||
data/bio_assembly/BIRD/3SM1.pdb data/bio_assembly/BIRD/3SM1.pdb J
|
||||
data/bio_assembly/BIRD/6DNO.pdb data/bio_assembly/BIRD/6DNO.pdb C
|
||||
data/bio_assembly/BIRD/6DTN.pdb data/bio_assembly/BIRD/6DTN.pdb A
|
||||
data/bio_assembly/BIRD/6M9D.pdb data/bio_assembly/BIRD/6M9D.pdb B
|
||||
data/bio_assembly/BIRD/6APR.pdb data/bio_assembly/BIRD/6APR.pdb I
|
||||
data/bio_assembly/BIRD/6V2D.pdb data/bio_assembly/BIRD/6V2D.pdb B
|
||||
data/bio_assembly/BIRD/6V2S.pdb data/bio_assembly/BIRD/6V2S.pdb C
|
||||
data/bio_assembly/BIRD/6V2R.pdb data/bio_assembly/BIRD/6V2R.pdb B
|
||||
data/bio_assembly/BIRD/5U66.pdb data/bio_assembly/BIRD/5U66.pdb B
|
||||
data/bio_assembly/BIRD/1M21.pdb data/bio_assembly/BIRD/1M21.pdb C
|
||||
data/bio_assembly/BIRD/1LS5.pdb data/bio_assembly/BIRD/1LS5.pdb C
|
||||
data/bio_assembly/BIRD/1M43.pdb data/bio_assembly/BIRD/1M43.pdb C
|
||||
data/bio_assembly/BIRD/2CF9.pdb data/bio_assembly/BIRD/2CF9.pdb I
|
||||
data/bio_assembly/BIRD/2CF8.pdb data/bio_assembly/BIRD/2CF8.pdb I
|
||||
data/bio_assembly/BIRD/2CN0.pdb data/bio_assembly/BIRD/2CN0.pdb I
|
||||
data/bio_assembly/BIRD/2F9N.pdb data/bio_assembly/BIRD/2F9N.pdb E
|
||||
data/bio_assembly/BIRD/2F9P.pdb data/bio_assembly/BIRD/2F9P.pdb E
|
||||
data/bio_assembly/BIRD/2FES.pdb data/bio_assembly/BIRD/2FES.pdb D
|
||||
data/bio_assembly/BIRD/2FEQ.pdb data/bio_assembly/BIRD/2FEQ.pdb D
|
||||
data/bio_assembly/BIRD/1APU.pdb data/bio_assembly/BIRD/1APU.pdb I
|
||||
data/bio_assembly/BIRD/1AQ7.pdb data/bio_assembly/BIRD/1AQ7.pdb B
|
||||
data/bio_assembly/BIRD/1O0D.pdb data/bio_assembly/BIRD/1O0D.pdb D
|
||||
data/bio_assembly/BIRD/2AGI.pdb data/bio_assembly/BIRD/2AGI.pdb A
|
||||
data/bio_assembly/BIRD/2ANK.pdb data/bio_assembly/BIRD/2ANK.pdb P
|
||||
data/bio_assembly/BIRD/1WB0.pdb data/bio_assembly/BIRD/1WB0.pdb B
|
||||
data/bio_assembly/BIRD/1W9V.pdb data/bio_assembly/BIRD/1W9V.pdb C
|
||||
data/bio_assembly/BIRD/1W6I.pdb data/bio_assembly/BIRD/1W6I.pdb B
|
||||
data/bio_assembly/BIRD/1QS8.pdb data/bio_assembly/BIRD/1QS8.pdb C
|
||||
data/bio_assembly/BIRD/1PSO.pdb data/bio_assembly/BIRD/1PSO.pdb I
|
||||
data/bio_assembly/BIRD/1POP.pdb data/bio_assembly/BIRD/1POP.pdb B
|
||||
data/bio_assembly/BIRD/1OYT.pdb data/bio_assembly/BIRD/1OYT.pdb I
|
||||
data/bio_assembly/BIRD/1NZQ.pdb data/bio_assembly/BIRD/1NZQ.pdb D
|
||||
data/bio_assembly/BIRD/1WVM.pdb data/bio_assembly/BIRD/1WVM.pdb C
|
||||
data/bio_assembly/BIRD/1XDH.pdb data/bio_assembly/BIRD/1XDH.pdb C
|
||||
data/bio_assembly/BIRD/1WKR.pdb data/bio_assembly/BIRD/1WKR.pdb I
|
||||
data/bio_assembly/BIRD/1BCS.pdb data/bio_assembly/BIRD/1BCS.pdb C
|
||||
data/bio_assembly/BIRD/1BCR.pdb data/bio_assembly/BIRD/1BCR.pdb C
|
||||
data/bio_assembly/BIRD/6OBR.pdb data/bio_assembly/BIRD/6OBR.pdb D
|
||||
data/bio_assembly/BIRD/6OBQ.pdb data/bio_assembly/BIRD/6OBQ.pdb C
|
||||
data/bio_assembly/BIRD/6OBU.pdb data/bio_assembly/BIRD/6OBU.pdb C
|
||||
data/bio_assembly/BIRD/1H0I.pdb data/bio_assembly/BIRD/1H0I.pdb C
|
||||
data/bio_assembly/BIRD/6XA4.pdb data/bio_assembly/BIRD/6XA4.pdb B
|
||||
data/bio_assembly/BIRD/6YZ6.pdb data/bio_assembly/BIRD/6YZ6.pdb C
|
||||
data/bio_assembly/BIRD/1FJM.pdb data/bio_assembly/BIRD/1FJM.pdb M
|
||||
data/bio_assembly/BIRD/6BKJ.pdb data/bio_assembly/BIRD/6BKJ.pdb F
|
||||
data/bio_assembly/BIRD/5WGQ.pdb data/bio_assembly/BIRD/5WGQ.pdb E
|
||||
data/bio_assembly/BIRD/4IMQ.pdb data/bio_assembly/BIRD/4IMQ.pdb B
|
||||
data/bio_assembly/BIRD/4INH.pdb data/bio_assembly/BIRD/4INH.pdb M
|
||||
data/bio_assembly/BIRD/4IMZ.pdb data/bio_assembly/BIRD/4IMZ.pdb B
|
||||
data/bio_assembly/BIRD/1TL9.pdb data/bio_assembly/BIRD/1TL9.pdb B
|
||||
data/bio_assembly/BIRD/1SGC.pdb data/bio_assembly/BIRD/1SGC.pdb B
|
||||
data/bio_assembly/BIRD/1IZE.pdb data/bio_assembly/BIRD/1IZE.pdb B
|
||||
data/bio_assembly/BIRD/1JRT.pdb data/bio_assembly/BIRD/1JRT.pdb B
|
||||
data/bio_assembly/BIRD/1JRS.pdb data/bio_assembly/BIRD/1JRS.pdb B
|
||||
data/bio_assembly/BIRD/4Y9W.pdb data/bio_assembly/BIRD/4Y9W.pdb B
|
||||
data/bio_assembly/BIRD/4NMT.pdb data/bio_assembly/BIRD/4NMT.pdb C
|
||||
data/bio_assembly/BIRD/4NMS.pdb data/bio_assembly/BIRD/4NMS.pdb C
|
||||
data/bio_assembly/BIRD/4NMR.pdb data/bio_assembly/BIRD/4NMR.pdb C
|
||||
data/bio_assembly/BIRD/4NMQ.pdb data/bio_assembly/BIRD/4NMQ.pdb C
|
||||
data/bio_assembly/BIRD/4NMP.pdb data/bio_assembly/BIRD/4NMP.pdb C
|
||||
data/bio_assembly/BIRD/4NMO.pdb data/bio_assembly/BIRD/4NMO.pdb C
|
||||
data/bio_assembly/BIRD/4MZJ.pdb data/bio_assembly/BIRD/4MZJ.pdb T
|
||||
data/bio_assembly/BIRD/3P72.pdb data/bio_assembly/BIRD/3P72.pdb B
|
||||
data/bio_assembly/BIRD/3OE0.pdb data/bio_assembly/BIRD/3OE0.pdb I
|
||||
data/bio_assembly/BIRD/4I7D.pdb data/bio_assembly/BIRD/4I7D.pdb B
|
||||
data/bio_assembly/BIRD/4I7C.pdb data/bio_assembly/BIRD/4I7C.pdb B
|
||||
data/bio_assembly/BIRD/4I7B.pdb data/bio_assembly/BIRD/4I7B.pdb B
|
||||
data/bio_assembly/BIRD/4I5N.pdb data/bio_assembly/BIRD/4I5N.pdb G
|
||||
data/bio_assembly/BIRD/4I5L.pdb data/bio_assembly/BIRD/4I5L.pdb G
|
||||
data/bio_assembly/BIRD/2P0R.pdb data/bio_assembly/BIRD/2P0R.pdb D
|
||||
data/bio_assembly/BIRD/2NYL.pdb data/bio_assembly/BIRD/2NYL.pdb G
|
||||
data/bio_assembly/BIRD/2NYM.pdb data/bio_assembly/BIRD/2NYM.pdb G
|
||||
data/bio_assembly/BIRD/2NQA.pdb data/bio_assembly/BIRD/2NQA.pdb D
|
||||
data/bio_assembly/BIRD/2NPP.pdb data/bio_assembly/BIRD/2NPP.pdb Y
|
||||
data/bio_assembly/BIRD/2QZX.pdb data/bio_assembly/BIRD/2QZX.pdb C
|
||||
data/bio_assembly/BIRD/2RMP.pdb data/bio_assembly/BIRD/2RMP.pdb B
|
||||
data/bio_assembly/BIRD/2PSX.pdb data/bio_assembly/BIRD/2PSX.pdb B
|
||||
data/bio_assembly/BIRD/2PSY.pdb data/bio_assembly/BIRD/2PSY.pdb B
|
||||
data/bio_assembly/BIRD/4ER2.pdb data/bio_assembly/BIRD/4ER2.pdb I
|
||||
data/bio_assembly/BIRD/4NMV.pdb data/bio_assembly/BIRD/4NMV.pdb C
|
||||
data/bio_assembly/BIRD/4EJK.pdb data/bio_assembly/BIRD/4EJK.pdb N
|
||||
data/bio_assembly/BIRD/4EJD.pdb data/bio_assembly/BIRD/4EJD.pdb C
|
||||
data/bio_assembly/BIRD/4EXH.pdb data/bio_assembly/BIRD/4EXH.pdb J
|
||||
data/bio_assembly/BIRD/4G5G.pdb data/bio_assembly/BIRD/4G5G.pdb I
|
||||
data/bio_assembly/BIRD/4BP9.pdb data/bio_assembly/BIRD/4BP9.pdb G
|
||||
data/bio_assembly/BIRD/3V4L.pdb data/bio_assembly/BIRD/3V4L.pdb B
|
||||
data/bio_assembly/BIRD/3V4O.pdb data/bio_assembly/BIRD/3V4O.pdb B
|
||||
data/bio_assembly/BIRD/3UOA.pdb data/bio_assembly/BIRD/3UOA.pdb L
|
||||
data/bio_assembly/BIRD/3UO8.pdb data/bio_assembly/BIRD/3UO8.pdb L
|
||||
data/bio_assembly/BIRD/3BPM.pdb data/bio_assembly/BIRD/3BPM.pdb D
|
||||
data/bio_assembly/BIRD/5LW1.pdb data/bio_assembly/BIRD/5LW1.pdb C
|
||||
data/bio_assembly/BIRD/5MS4.pdb data/bio_assembly/BIRD/5MS4.pdb E
|
||||
data/bio_assembly/BIRD/5K99.pdb data/bio_assembly/BIRD/5K99.pdb C
|
||||
data/bio_assembly/BIRD/5JPF.pdb data/bio_assembly/BIRD/5JPF.pdb M
|
||||
data/bio_assembly/BIRD/5N7Q.pdb data/bio_assembly/BIRD/5N7Q.pdb I
|
||||
data/bio_assembly/BIRD/5I70.pdb data/bio_assembly/BIRD/5I70.pdb D
|
||||
data/bio_assembly/BIRD/5HVP.pdb data/bio_assembly/BIRD/5HVP.pdb C
|
||||
data/bio_assembly/BIRD/5FC3.pdb data/bio_assembly/BIRD/5FC3.pdb A
|
||||
data/bio_assembly/BIRD/5FC2.pdb data/bio_assembly/BIRD/5FC2.pdb A
|
||||
data/bio_assembly/BIRD/5EPK.pdb data/bio_assembly/BIRD/5EPK.pdb B
|
||||
data/bio_assembly/BIRD/5EPJ.pdb data/bio_assembly/BIRD/5EPJ.pdb B
|
||||
data/bio_assembly/BIRD/5EQ0.pdb data/bio_assembly/BIRD/5EQ0.pdb B
|
||||
data/bio_assembly/BIRD/2XE4.pdb data/bio_assembly/BIRD/2XE4.pdb B
|
||||
data/bio_assembly/BIRD/2Z2P.pdb data/bio_assembly/BIRD/2Z2P.pdb C
|
||||
data/bio_assembly/BIRD/3E7A.pdb data/bio_assembly/BIRD/3E7A.pdb C
|
||||
data/bio_assembly/BIRD/3DW8.pdb data/bio_assembly/BIRD/3DW8.pdb G
|
||||
data/bio_assembly/BIRD/3EGH.pdb data/bio_assembly/BIRD/3EGH.pdb E
|
||||
data/bio_assembly/BIRD/3EMY.pdb data/bio_assembly/BIRD/3EMY.pdb B
|
||||
data/bio_assembly/BIRD/3MGB.pdb data/bio_assembly/BIRD/3MGB.pdb C
|
||||
data/bio_assembly/BIRD/3MG9.pdb data/bio_assembly/BIRD/3MG9.pdb B
|
||||
data/bio_assembly/BIRD/3FGA.pdb data/bio_assembly/BIRD/3FGA.pdb E
|
||||
data/bio_assembly/BIRD/3FNT.pdb data/bio_assembly/BIRD/3FNT.pdb I
|
||||
data/bio_assembly/BIRD/3FV3.pdb data/bio_assembly/BIRD/3FV3.pdb J
|
||||
data/bio_assembly/BIRD/2V3H.pdb data/bio_assembly/BIRD/2V3H.pdb I
|
||||
data/bio_assembly/BIRD/2V3O.pdb data/bio_assembly/BIRD/2V3O.pdb I
|
||||
data/bio_assembly/BIRD/4YV8.pdb data/bio_assembly/BIRD/4YV8.pdb B
|
||||
data/bio_assembly/BIRD/3Q4K.pdb data/bio_assembly/BIRD/3Q4K.pdb C
|
||||
data/bio_assembly/BIRD/3Q4L.pdb data/bio_assembly/BIRD/3Q4L.pdb C
|
||||
data/bio_assembly/BIRD/4TVG.pdb data/bio_assembly/BIRD/4TVG.pdb C
|
||||
data/bio_assembly/BIRD/5D13.pdb data/bio_assembly/BIRD/5D13.pdb E
|
||||
data/bio_assembly/BIRD/1A2C.pdb data/bio_assembly/BIRD/1A2C.pdb I
|
||||
data/bio_assembly/BIRD/2IAE.pdb data/bio_assembly/BIRD/2IAE.pdb M
|
||||
data/bio_assembly/BIRD/2IE3.pdb data/bio_assembly/BIRD/2IE3.pdb I
|
||||
data/bio_assembly/BIRD/2H6T.pdb data/bio_assembly/BIRD/2H6T.pdb B
|
||||
data/bio_assembly/BIRD/2FO5.pdb data/bio_assembly/BIRD/2FO5.pdb E
|
||||
253
data/data_fpocket.csv
Normal file
253
data/data_fpocket.csv
Normal file
@@ -0,0 +1,253 @@
|
||||
2R9B;C,D;PLM2_PLAFA;;;;
|
||||
3URI;B;CARP_CRYPA;;;;
|
||||
3URL;B;CARP_CRYPA;;;;
|
||||
3V3B;C,D;MDM2_HUMAN;;;;
|
||||
3UQP;B;BACE1_HUMAN;;;;
|
||||
3UQR;D,E,F;BACE1_HUMAN;;;;
|
||||
5JXH;H;FURIN_HUMAN;;;;
|
||||
5JXJ;H;FURIN_HUMAN;;;;
|
||||
4RCP;B;PLK1_HUMAN;;;;
|
||||
4TPG;E;Q8EHE6_SHEON;;;;
|
||||
4RYD;H, I, J, K, L, N;FURIN_HUMAN;;;;
|
||||
4O6W;C;PLK1_HUMAN;;;;
|
||||
4K1E;B;KLK4_HUMAN;;;;
|
||||
4DV9;B;BACE1_HUMAN;;;;
|
||||
4DVF;C,D;BACE1_HUMAN;;;;
|
||||
4EZP;C,D;DNAK_ECOLI;;;;
|
||||
4FBX;B;CSK21_HUMAN;;;;
|
||||
4G35;B;MCL1_MOUSE;-----;;;
|
||||
5DNJ;B;PLK1_MOUSE;;;;
|
||||
4WHH;B;PLK1_HUMAN;;;;
|
||||
4WHK;B;PLK1_HUMAN;;;;
|
||||
4WHL;B;PLK1_HUMAN;;;;
|
||||
1SFI;I;TRY1_BOVIN;;;;
|
||||
3RQ7;B;PLK1_HUMAN;;;;
|
||||
3SNA;H;R1AB_CVHSA;;;;
|
||||
3SNB;H;R1A_CVHSA;;;;
|
||||
3SNC;H;R1A_CVHSA;-----;;;
|
||||
3SND;C,D;R1A_CVHSA;;;;
|
||||
3SNE;H;R1A_CVHSA;;;;
|
||||
3S70;B,D;CASP6_HUMAN;;;;
|
||||
1OKX;C,D;CELA1_PIG;------------;;;
|
||||
6VXY;C;TRY1_BOVIN;;;;
|
||||
3VFK;G;UBC_HUMAN;;;;
|
||||
3VFJ;G;MALE_ECOLI;;;;
|
||||
2XAD;E,F,G,H;Q6ZZJ1_ACTTI;;;;
|
||||
4MFL;B;Q6F275_MESFL;;;;
|
||||
4MFP;B;A0A2Z5FPF1_9MUSC;;;;
|
||||
4MFQ;B;Q70AY4_ACTTI;;;;
|
||||
4PJZ;B;D9IEF7_BPT4;;;;
|
||||
4PK0;B;D9IEF7_BPT4;;;;
|
||||
4EEC;C;STAL_STRTO;;;;
|
||||
4JNA;H,I;A4ZPY8_CHRVL;;;;
|
||||
4NEC;E,F,G,H;PCSK4_MOUSE;;;;
|
||||
3AH8;Y;GNAI1_RAT;;;;
|
||||
3RQD;C,D;HDAC8_HUMAN;;;;
|
||||
2CV3;B;CELA1_PIG;;;;
|
||||
2RMC;B,D,F,H;PPIC_MOUSE;;;;
|
||||
4TOT;E,F,G,H;PPIF_RAT;;;;
|
||||
6O21;B;KLK4_HUMAN;;;;
|
||||
6C1Q;L;C5AR1_HUMAN;;;;
|
||||
6C1R;L;C5AR1_HUMAN;;;;
|
||||
1MF8;D;CANB1_HUMAN;;;;
|
||||
3WDC;B;CLPC1_MYCTU;;;;
|
||||
3WDD;B;CLPC1_MYCTU;;;;
|
||||
3WDE;B;CLPC1_MYCTU;;;;
|
||||
3WMG;B;M1VAN7_CYAM1;;;;
|
||||
3WNE;C,D;POL_HV1N5;;;;
|
||||
3WNF;C,D;POL_HV1N5;;;;
|
||||
3WNG;C,D;POL_HV1N5;;;;
|
||||
2Z6W;M,N;PPIF_HUMAN;;;;
|
||||
4MNW;B;UROK_HUMAN;;;;
|
||||
4MNX;B;UROK_HUMAN;;;;
|
||||
4MNY;C,D;UROK_HUMAN;;;;
|
||||
4OS1;B;UROK_HUMAN;;;;
|
||||
4OS2;B;UROK_HUMAN;;;;
|
||||
4OS4;B;UROK_HUMAN;;;;
|
||||
4OS5;B;UROK_HUMAN;;;;
|
||||
4OS6;B;UROK_HUMAN;;;;
|
||||
4OS7;B;UROK_HUMAN;;;;
|
||||
4IPZ;B;PPIA_HUMAN;;;;
|
||||
4JJM;E,F;D0ELH5_CITSI;;;;
|
||||
4JK5;B;UROK_HUMAN;;;;
|
||||
4JK6;B;UROK_HUMAN;;;;
|
||||
4DGC;F,G,H,I,J;PPIA_MACMU;;;;
|
||||
4GLY;B;UROK_HUMAN;;;;
|
||||
4YV9;E,F,G,H;A0A0J9X288_STRDY;;;;
|
||||
4ZJX;B;BXA1_CLOBH;;;;
|
||||
4ZQW;A,C;CDIA4_ECO5C;;;;
|
||||
3BO7;E,F,G,H;D0VWS5_TOXGO;;;;
|
||||
3EOV;C,D;Q9U9R3_LEIDO;;;;
|
||||
4GUX;D,E,F;TRY1_BOVIN;;;;
|
||||
4GVU;D,E,F;CELA1_PIG;;;;
|
||||
4HGC;I;TRY1_BOVIN;;;;
|
||||
4HY7;B;Q93W25_WHEAT;;;;
|
||||
2WFJ;B;PPIG_HUMAN;;;;
|
||||
2X7K;B;PPIL1_HUMAN;;;;
|
||||
4KEL;B;KLK4_HUMAN;;;;
|
||||
4L3O;E,F,G,H;SIR2_HUMAN;;;;
|
||||
4KTU;B;TRY1_BOVIN;;;;
|
||||
4KTS;B;TRY1_BOVIN;;;;
|
||||
4KTC;B,D;POLG_HCVJA;;;;
|
||||
3AVA;X,Y;POL_HV1N5;;;;
|
||||
3AVB;X,Y;POL_HV1N5;;;;
|
||||
3AV9;X,Y;POL_HV1N5;;;;
|
||||
3AVI;D,F;POL_HV1B1;;;;
|
||||
3AVJ;D,F;POL_HV1N5;;;;
|
||||
3AVK;D,F;POL_HV1N5;;;;
|
||||
3AVL;E,F;POL_HV1N5;;;;
|
||||
3AVM;D,F;POL_HV1N5;;;;
|
||||
3AVN;G,H;POL_HV1N5;;;;
|
||||
5XN3;B;NOS2_HUMAN;;;;
|
||||
6CN8;B;CLPC1_MYCTU;;;;
|
||||
6DN8;B,D,F;SPSB4_HUMAN;;;;
|
||||
6DN5;B;SPSB2_HUMAN;;;;
|
||||
6DN7;B,D;SPSB4_HUMAN;;;;
|
||||
6DN6;B;SPSB2_HUMAN;;;;
|
||||
5VI6;B;HDAC8_HUMAN;;;;
|
||||
4WVT;C,D;XIAP_HUMAN;;;;
|
||||
4WVU;B;XIAP_HUMAN;;;;
|
||||
2POY;T,U,V;A3FQA7_CRYPI;;;;
|
||||
2OJU;C,D;PPIL3_HUMAN;;;;
|
||||
1BCK;C;PPIA_HUMAN;;;;
|
||||
1CWC;C;PPIA_HUMAN;;;;
|
||||
1CWB;C;PPIA_HUMAN;;;;
|
||||
1CWA;C;PPIA_HUMAN;;;;
|
||||
1CYN;C;PPIB_HUMAN;Enzyme;;;
|
||||
1IKF;C;?;;;;
|
||||
6J67;C;TERF2_HUMAN;;;;
|
||||
3PMP;C,D;PMP22_HUMAN;;;;
|
||||
1MIK;B;PPIA_HUMAN;;;;
|
||||
1QNH;C,D;Q25756_PLAFA;;;;
|
||||
1QNG;D;Q25756_PLAFA;;;;
|
||||
1TK2;B;NEP4_DROME;;;;
|
||||
1TMB;T;THRB_HUMAN;;;;
|
||||
1W9U;C,D;CHIB1_ASPFM;;;;
|
||||
1WAW;B;CHIT1_HUMAN;;;;
|
||||
1XQ7;D,E,F;Q4DPB9_TRYCC;;;;
|
||||
2BCD;B;PP1G_HUMAN;;;;
|
||||
3SM1;J,M;Q9E7M1_9GAMR;;;;
|
||||
6DNO;C;PP1A_HUMAN;;;;
|
||||
6DTN;A,C;NTM1A_HUMAN;;;;
|
||||
6M9D;B;PICP_PSESR;;;;
|
||||
6APR;I;CARP_RHICH;;;;
|
||||
6V2D;B, D, F, H, J, L;CDYL2_HUMAN;;;;
|
||||
6V2S;C,D;MPP8_HUMAN;;;;
|
||||
6V2R;B;CBX7_HUMAN;;;;
|
||||
5U66;B;IGHG1_HUMAN;;;;
|
||||
1M21;C,D;Q8RJN5_STEMA;;;;
|
||||
1LS5;C,D;Q8IM16_PLAF7;;;;
|
||||
1M43;C,D;PLM2_PLAFA;;;;
|
||||
2CF9;I;THRB_HUMAN;;;;
|
||||
2CF8;I;THRB_HUMAN;;;;
|
||||
2CN0;I;THRB_HUMAN;;;;
|
||||
2F9N;E, F, G, H;TRYB1_HUMAN;;;;
|
||||
2F9P;E, F, G, H;TRYB1_HUMAN;;;;
|
||||
2FES;D;THRB_HUMAN;;;;
|
||||
2FEQ;D;THRB_HUMAN;;;;
|
||||
1APU;I;PEPA1_PENJA;;;;
|
||||
1AQ7;B;TRY1_BOVIN;;;;
|
||||
1O0D;D;THRB_HUMAN;;;;
|
||||
2AGI;A;TRY1_BOVIN;;;;
|
||||
2ANK;P;THRB_HUMAN;;;;
|
||||
1WB0;B;CHIT1_HUMAN;;;;
|
||||
1W9V;C,D;CHIB1_ASPFU;;;;
|
||||
1W6I;B,D;PLM2_PLAFA;;;;
|
||||
1QS8;C,D;O60989_PLAVI;;;;
|
||||
1PSO;I;PEPA4_HUMAN;;;;
|
||||
1POP;B;PAPA1_CARPA;;;;
|
||||
1OYT;I;HIR2B_HIRME;;;;
|
||||
1NZQ;D;THRB_HUMAN;;;;
|
||||
1WVM;C,D;Q65Z69_9GAMM;;;;
|
||||
1XDH;C,D;PLM2_PLAFA;;;;
|
||||
1WKR;I;CARP_IRPLA;;;;
|
||||
1BCS;C;CBP2_WHEAT;;;;
|
||||
1BCR;C;CBP2_WHEAT;;;;
|
||||
6OBR;D,E;PP1A_HUMAN;;;;
|
||||
6OBQ;C,D;PP1A_HUMAN;;;;
|
||||
6OBU;C,D;PP1A_HUMAN;;;;
|
||||
1H0I;C,D;CHIB_SERMA;;;;
|
||||
6XA4;B;R1AB_SARS2;;;;
|
||||
6YZ6;C;R1AB_SARS2;;;;
|
||||
1FJM;M,N;PP1A_RABIT;;;;
|
||||
6BKJ;F, G, H, I;CAN3_HUMAN;;;;
|
||||
5WGQ;E,F;ESR1_HUMAN;;;;
|
||||
4IMQ;B;POLG_NVN68;;;;
|
||||
4INH;J, M, N, O, P, Q, S, T;POLG_NVN68;;;;
|
||||
4IMZ;B;POLG_NVN68;;;;
|
||||
1TL9;B;CAN1_RAT;;;;
|
||||
1SGC;B;PRTA_STRGR;;;;
|
||||
1IZE;B;PEPA_ASPOZ;;;;
|
||||
1JRT;B;TRY1_BOVIN;;;;
|
||||
1JRS;B;TRY1_BOVIN;;;;
|
||||
4Y9W;B;G8B6Y8_CANPC;;;;
|
||||
4NMT;C,D;GOPC_HUMAN;;;;
|
||||
4NMS;C,D;GOPC_HUMAN;;;;
|
||||
4NMR;C,D;GOPC_HUMAN;;;;
|
||||
4NMQ;C,D;GOPC_HUMAN;;;;
|
||||
4NMP;C,D;GOPC_HUMAN;;;;
|
||||
4NMO;C,D;GOPC_HUMAN;;;;
|
||||
4MZJ;T;Q8I4W8_PLAF7;;;;
|
||||
3P72;B;GP1BA_HUMAN;;;;
|
||||
3OE0;I;CXCR4_HUMAN;;;;
|
||||
4I7D;B,D;SIAH1_HUMAN;;;;
|
||||
4I7C;B,D;SIAH1_HUMAN;;;;
|
||||
4I7B;B,D;SIAH1_HUMAN;;;;
|
||||
4I5N;G,H;2AAA_HUMAN;;;;
|
||||
4I5L;G,H;PP2AA_HUMAN;;;;
|
||||
2P0R;D,E;CAN9_HUMAN;;;;
|
||||
2NYL;G,H;2A5G_HUMAN;;;;
|
||||
2NYM;G,H;2A5G_HUMAN;;;;
|
||||
2NQA;D,E;CAN8_HUMAN;;;;
|
||||
2NPP;X,Y;PP2AA_HUMAN;;;;
|
||||
2QZX;C,D;CARP5_CANAL;;;;
|
||||
2RMP;B;CARP_RHIMI;;;;
|
||||
2PSX;B;KLK5_HUMAN;;;;
|
||||
2PSY;B;KLK5_HUMAN;;;;
|
||||
4ER2;I;CARP_CRYPA;;;;
|
||||
4NMV;C,D;GOPC_HUMAN;;;;
|
||||
4EJK;N;POL_HV1Z2;;;;
|
||||
4EJD;C;POL_HV1Z2;;;;
|
||||
4EXH;J, M, P;Q9E7M1_9GAMR;;;;
|
||||
4G5G;I;EFTU1_ECOLI;;;;
|
||||
4BP9;G, H, I, J, K, L;O76728_TRYBB;;;;
|
||||
3V4L;B;MALT1_MOUSE;;;;
|
||||
3V4O;B;MALT1_HUMAN;;;;
|
||||
3UOA;L, M;MALT1_HUMAN;;;;
|
||||
3UO8;L, M;MALT1_HUMAN;;;;
|
||||
3BPM;C,D;Q9NAW4_PLAFA;;;;
|
||||
5LW1;C, F, I;MK08_HUMAN;;;;
|
||||
5MS4;E, F, G, H;KLK8_HUMAN;;;;
|
||||
5K99;C, D;A0A0F7RFM6_BACAN;;;;
|
||||
5JPF;M,N;C4YM68_CANAW;;;;
|
||||
5N7Q;I,J;V5HCK7_IXORI;;;;
|
||||
5I70;C,D;W7FF86_PLAF8;;;;
|
||||
5HVP;C;POL_HV1N5;;;;
|
||||
5FC3;A;G0SHM3_CHATD;;;;
|
||||
5FC2;A;G0SHM3_CHATD;;;;
|
||||
5EPK;B;CBX2_HUMAN;;;;
|
||||
5EPJ;B;CBX7_HUMAN;;;;
|
||||
5EQ0;B;CBX8_HUMAN;;;;
|
||||
2XE4;B;Q4QHU7_LEIMA;;;;
|
||||
2Z2P;C,D;VGB_STAAU;;;;
|
||||
3E7A;C,D;PP1A_HUMAN;;;;
|
||||
3DW8;G,H;PP2AA_HUMAN;;;;
|
||||
3EGH;E, F;NEB2_RAT;;;;
|
||||
3EMY;B;Q2WBH2_HYPJE;;;;
|
||||
3MGB;C,D;B7T1D7_9BACT;;;;
|
||||
3MG9;B, C;B7T1D7_9BACT;;;;
|
||||
3FGA;E;PP2AA_HUMAN;;;;
|
||||
3FNT;I;Q8IM15_PLAF7;;;;
|
||||
3FV3;I, J, K, L, M, N, O, P;CARP1_CANPA;;;;
|
||||
2V3H;I;THRB_HUMAN;;;;
|
||||
2V3O;I;THRB_HUMAN;;;;
|
||||
4YV8;B;CATK_HUMAN;;;;
|
||||
3Q4K;C,D;DPO3B_ECOLI;;;;
|
||||
3Q4L;C,D;DPO3B_ECOLI;;;;
|
||||
4TVG;C;Q90EA1_9HIV1;;;;
|
||||
5D13;E, F, G, H;DLG4_RAT;;;;
|
||||
1A2C;I;THRB_HUMAN;;;;
|
||||
2IAE;M,N;PP2AA_HUMAN;;;;
|
||||
2IE3;I;PP2AA_HUMAN;;;;
|
||||
2H6T;B;CARP3_CANAL;;;;
|
||||
2FO5;E, F, G, H;CYSP2_HORVU;;;;
|
||||
|
160
data/non_BIRD.csv
Normal file
160
data/non_BIRD.csv
Normal file
@@ -0,0 +1,160 @@
|
||||
6FMP;C;KEAP1_HUMAN
|
||||
6QWN;F, G, H, I, J;PLRX1_ARATH
|
||||
4D2D;B;Q5M4H8_STRT2
|
||||
6QXP;I, J, K, L, M, N, O, P;LRX2_ARATH
|
||||
2OBH;C,D;CETN2_HUMAN
|
||||
1YK1;E;ANPRC_HUMAN
|
||||
3KD7;G, H, I, J, K;
|
||||
1YC5;B;NPD_THEMA
|
||||
2H4F;D;NPD_THEMA
|
||||
6F0Y;B;ASF1_YEAST
|
||||
5OJ5;B;YC48L_THEEB
|
||||
5OJR;E, F;YC48L_THEEB
|
||||
2QBX;D, P;EPHB2_HUMAN
|
||||
5D0J;L, M;GRB7_HUMAN
|
||||
3FBR;B;
|
||||
3JR3;D;NPD_THEMA
|
||||
3SVM;P;MPP8_HUMAN
|
||||
4Z5W;P, Q;PSKR1_DAUCA
|
||||
5E1D;D, E;NTM1A_HUMAN
|
||||
6Q1U;C,D;PLMN_HUMAN
|
||||
6WZZ;B;GID4_HUMAN
|
||||
1A1R;C,D;POLG_HCVH
|
||||
1EJH;E, F, G, H;IF4E_MOUSE
|
||||
1BZH;I, J, K, L, M, N, O, P;PTN1_HUMAN
|
||||
1AQC;C,D;APBA1_HUMAN
|
||||
6TWQ;C,D;ANXA2_HUMAN
|
||||
1YTJ;I;POL_SIVM1
|
||||
1YTH;I;POL_HV1A2
|
||||
1YTG;I;POL_HV1A2
|
||||
6CD9;B;GID4_HUMAN
|
||||
6C4U;G, H, I, J, K, L;RAD53_YEAST
|
||||
5H6Y;B;BPTF_HUMAN
|
||||
5I3L;C;DPF3_HUMAN
|
||||
6SEO;L;TEAD4_HUMAN
|
||||
6SEN;L, M;TEAD4_HUMAN
|
||||
2ITK;B;PIN1_HUMAN
|
||||
2Q5A;B;PIN1_HUMAN
|
||||
3UKW;C;IMA1_MOUSE
|
||||
3UKX;C;IMA1_MOUSE
|
||||
2VAY;B;CALM1_HUMAN
|
||||
5UW3;E, F, G, H;R4P353_9CARY
|
||||
5U1Q;L, M, N, P;GRB7_HUMAN
|
||||
4ZRT;B;PTN1_HUMAN
|
||||
5EEL;L, M, N, P, Q, R;GRB7_HUMAN
|
||||
5W4E;A, D;A0A2R2JFW7_9BASI
|
||||
4NY3;C,D;PTPA_HUMAN
|
||||
4AKT;C;Q52QJ1_PRODI
|
||||
5XWR;C,D;RBBP4_HUMAN
|
||||
2H4H;B;NPD_THEMA
|
||||
3AGY;C, D, F;DNJB1_HUMAN
|
||||
3AGZ;C, D, E, F;DNJB1_HUMAN
|
||||
3TWS;E, F, G, H;TNKS2_HUMAN
|
||||
3TWT;E, F, G, H;TNKS2_HUMAN
|
||||
3TWV;E, F, G, H;TNKS2_HUMAN
|
||||
4DRW;E, F;S10AA_HUMAN
|
||||
1EJ4;B;IF4E_MOUSE
|
||||
6TWX;C, D;MAGI1_HUMAN
|
||||
5K4F;C, D;GOPC_HUMAN
|
||||
1XJ7;B;ANDR_HUMAN
|
||||
1WBP;B;SRPK1_HUMAN
|
||||
1KA6;B;SH21A_HUMAN
|
||||
6CDG;B;GID4_HUMAN
|
||||
5N7F;C;MAGI1_HUMAN
|
||||
6CD8;C,D;GID4_HUMAN
|
||||
5N7D;C;MAGI1_HUMAN
|
||||
2IG0;B;TP53B_HUMAN
|
||||
2RLY;P;TCRG1_MOUSE
|
||||
5D94;B;MLP3B_HUMAN
|
||||
5IC3;C,D;GOPC_HUMAN
|
||||
3HS8;P;AP2A2_MOUSE
|
||||
3HS9;P;AP2B1_RAT
|
||||
3EG6;C;WDR5_HUMAN
|
||||
3L3Q;B, C;IMA1_MOUSE
|
||||
3O71;B;MK01_RAT
|
||||
3RZ9;B;IMA1_MOUSE
|
||||
3RZ2;C,D;TP4A1_RAT
|
||||
3RZX;B;IMA1_MOUSE
|
||||
4HH6;Z;D3GUW1_ECO44
|
||||
4GQ6;B;MEN1_HUMAN
|
||||
3WA4;B;GRB2_HUMAN
|
||||
3ZMP;C,D;PTN1_HUMAN
|
||||
3UL1;A;IMA1_MOUSE
|
||||
5GG4;E, F, G, H;UBP7_HUMAN
|
||||
5GJH;B, D;GRAP2_HUMAN
|
||||
4QE8;C, D;NR1H4_HUMAN
|
||||
4QE6;B;NR1H4_HUMAN
|
||||
5E6Q;A;IMA1_MOUSE
|
||||
5EOD;B;FA11_HUMAN
|
||||
4LP9;I;CARP_CRYPA
|
||||
4M91;B;TUSC3_HUMAN
|
||||
4M92;B;TUSC3_HUMAN
|
||||
5W4F;A, D;IMA1_MOUSE
|
||||
4O56;B;PLK1_HUMAN
|
||||
4YOS;E;RBL1_HUMAN
|
||||
4Z63;P;PSKR1_ARATH
|
||||
2YJD;C, D;ESR2_HUMAN
|
||||
4X3O;C;SIR2_HUMAN
|
||||
4X3P;C;SIR2_HUMAN
|
||||
2H9P;B;WDR5_HUMAN
|
||||
2H9N;B,D;WDR5_HUMAN
|
||||
1LKL;B;LCK_HUMAN
|
||||
1LKK;B;LCK_HUMAN
|
||||
3IOL;B;GLP1R_HUMAN
|
||||
5DNJ;B;PLK1_MOUSE
|
||||
6P5L;D;UBP7_HUMAN
|
||||
6Y4Q;C, D;MDM2_HUMAN
|
||||
1QKB;B;OPPA_SALTY
|
||||
1QKA;B;OPPA_SALTY
|
||||
1E6I;P;GCN5_YEAST
|
||||
6RJP;C,D;B2LA1_HUMAN
|
||||
1OHE;B;CC14B_HUMAN
|
||||
1Q1S;A,B;LT_SV40
|
||||
1G5J;B;B2CL1_HUMAN
|
||||
1JEV;B;OPPA_SALTY
|
||||
1JEU;B;OPPA_SALTY
|
||||
1JET;B;OPPA_SALTY
|
||||
1B32;B;OPPA_SALTY
|
||||
1B46;B;OPPA_SALTY
|
||||
1B9J;B;OPPA_SALTY
|
||||
6JXU;B;SUMO1_HUMAN
|
||||
6EJ8;B;XYLT1_HUMAN
|
||||
6EJ9;B;XYLT1_HUMAN
|
||||
1O6P;C, D, E, F;IMB1_HUMAN
|
||||
5OK6;C, D;UBP11_HUMAN
|
||||
2IV8;P, Q;AP2B1_HUMAN
|
||||
2OY2;W,Y;MMP8_HUMAN
|
||||
2OXW;X;MMP12_HUMAN
|
||||
2O5G;B;CALM_CHICK
|
||||
3GLU;B;SIR3_HUMAN
|
||||
2Y1N;B, D;CBL_HUMAN
|
||||
3FDL;B;B2CL1_HUMAN
|
||||
3JZO;P;MDM4_HUMAN
|
||||
3PDH;D;NPD_THEMA
|
||||
3RC0;P, Q;SETD6_HUMAN
|
||||
4FII;B;PAK4_HUMAN
|
||||
3ZMQ;C;PTN1_HUMAN
|
||||
3ZRJ;X,Y;
|
||||
3SRJ;C, D, E, F;Q7KQK5_PLAF7
|
||||
5FOS;C;RADA_PYRFU
|
||||
5GH9;B;CBP_HUMAN
|
||||
5TWH;E;MOB1A_HUMAN
|
||||
5TYI;L, M, N, P;GRB7_HUMAN
|
||||
5UW5;E, F, G, H;R4P353_9CARY
|
||||
5UW7;C, D;R4P353_9CARY
|
||||
5K9S;B, C;IMA1_MOUSE
|
||||
5AFG;B;MDM2_HUMAN
|
||||
4QSY;B;PTN11_HUMAN
|
||||
5VLA;Z;PCSK9_HUMAN
|
||||
5VTB;B;RBBP4_HUMAN
|
||||
4O6W;C;PLK1_HUMAN
|
||||
4Y6L;C, D;SIR2_HUMAN
|
||||
4Z2V;C, P;HOAVI_HOEPD
|
||||
2Z3L;C, D;LFTR_ECOLI
|
||||
2Z3N;C, D;LFTR_ECOLI
|
||||
4X6S;L, M;GRB7_HUMAN
|
||||
4OKF;A;RNAS1_BOVIN
|
||||
6HON;B, D;CNOT9_HUMAN
|
||||
6HOM;B, D;CNOT9_HUMAN
|
||||
6HV2;B;MMP13_HUMAN
|
||||
5X7B;L, N;PTN11_HUMAN
|
||||
|
160
data/non_bird_test.txt
Normal file
160
data/non_bird_test.txt
Normal file
@@ -0,0 +1,160 @@
|
||||
data/bio_assembly/NO_BIRD/6FMP.pdb data/bio_assembly/NO_BIRD/6FMP.pdb C
|
||||
data/bio_assembly/NO_BIRD/6QWN.pdb data/bio_assembly/NO_BIRD/6QWN.pdb F
|
||||
data/bio_assembly/NO_BIRD/4D2D.pdb data/bio_assembly/NO_BIRD/4D2D.pdb B
|
||||
data/bio_assembly/NO_BIRD/6QXP.pdb data/bio_assembly/NO_BIRD/6QXP.pdb I
|
||||
data/bio_assembly/NO_BIRD/2OBH.pdb data/bio_assembly/NO_BIRD/2OBH.pdb C
|
||||
data/bio_assembly/NO_BIRD/1YK1.pdb data/bio_assembly/NO_BIRD/1YK1.pdb E
|
||||
data/bio_assembly/NO_BIRD/3KD7.pdb data/bio_assembly/NO_BIRD/3KD7.pdb G
|
||||
data/bio_assembly/NO_BIRD/1YC5.pdb data/bio_assembly/NO_BIRD/1YC5.pdb B
|
||||
data/bio_assembly/NO_BIRD/2H4F.pdb data/bio_assembly/NO_BIRD/2H4F.pdb D
|
||||
data/bio_assembly/NO_BIRD/6F0Y.pdb data/bio_assembly/NO_BIRD/6F0Y.pdb B
|
||||
data/bio_assembly/NO_BIRD/5OJ5.pdb data/bio_assembly/NO_BIRD/5OJ5.pdb B
|
||||
data/bio_assembly/NO_BIRD/5OJR.pdb data/bio_assembly/NO_BIRD/5OJR.pdb E
|
||||
data/bio_assembly/NO_BIRD/2QBX.pdb data/bio_assembly/NO_BIRD/2QBX.pdb D
|
||||
data/bio_assembly/NO_BIRD/5D0J.pdb data/bio_assembly/NO_BIRD/5D0J.pdb L
|
||||
data/bio_assembly/NO_BIRD/3FBR.pdb data/bio_assembly/NO_BIRD/3FBR.pdb B
|
||||
data/bio_assembly/NO_BIRD/3JR3.pdb data/bio_assembly/NO_BIRD/3JR3.pdb D
|
||||
data/bio_assembly/NO_BIRD/3SVM.pdb data/bio_assembly/NO_BIRD/3SVM.pdb P
|
||||
data/bio_assembly/NO_BIRD/4Z5W.pdb data/bio_assembly/NO_BIRD/4Z5W.pdb P
|
||||
data/bio_assembly/NO_BIRD/5E1D.pdb data/bio_assembly/NO_BIRD/5E1D.pdb D
|
||||
data/bio_assembly/NO_BIRD/6Q1U.pdb data/bio_assembly/NO_BIRD/6Q1U.pdb C
|
||||
data/bio_assembly/NO_BIRD/6WZZ.pdb data/bio_assembly/NO_BIRD/6WZZ.pdb B
|
||||
data/bio_assembly/NO_BIRD/1A1R.pdb data/bio_assembly/NO_BIRD/1A1R.pdb C
|
||||
data/bio_assembly/NO_BIRD/1EJH.pdb data/bio_assembly/NO_BIRD/1EJH.pdb E
|
||||
data/bio_assembly/NO_BIRD/1BZH.pdb data/bio_assembly/NO_BIRD/1BZH.pdb I
|
||||
data/bio_assembly/NO_BIRD/1AQC.pdb data/bio_assembly/NO_BIRD/1AQC.pdb C
|
||||
data/bio_assembly/NO_BIRD/6TWQ.pdb data/bio_assembly/NO_BIRD/6TWQ.pdb C
|
||||
data/bio_assembly/NO_BIRD/1YTJ.pdb data/bio_assembly/NO_BIRD/1YTJ.pdb I
|
||||
data/bio_assembly/NO_BIRD/1YTH.pdb data/bio_assembly/NO_BIRD/1YTH.pdb I
|
||||
data/bio_assembly/NO_BIRD/1YTG.pdb data/bio_assembly/NO_BIRD/1YTG.pdb I
|
||||
data/bio_assembly/NO_BIRD/6CD9.pdb data/bio_assembly/NO_BIRD/6CD9.pdb B
|
||||
data/bio_assembly/NO_BIRD/6C4U.pdb data/bio_assembly/NO_BIRD/6C4U.pdb G
|
||||
data/bio_assembly/NO_BIRD/5H6Y.pdb data/bio_assembly/NO_BIRD/5H6Y.pdb B
|
||||
data/bio_assembly/NO_BIRD/5I3L.pdb data/bio_assembly/NO_BIRD/5I3L.pdb C
|
||||
data/bio_assembly/NO_BIRD/6SEO.pdb data/bio_assembly/NO_BIRD/6SEO.pdb L
|
||||
data/bio_assembly/NO_BIRD/6SEN.pdb data/bio_assembly/NO_BIRD/6SEN.pdb L
|
||||
data/bio_assembly/NO_BIRD/2ITK.pdb data/bio_assembly/NO_BIRD/2ITK.pdb B
|
||||
data/bio_assembly/NO_BIRD/2Q5A.pdb data/bio_assembly/NO_BIRD/2Q5A.pdb B
|
||||
data/bio_assembly/NO_BIRD/3UKW.pdb data/bio_assembly/NO_BIRD/3UKW.pdb C
|
||||
data/bio_assembly/NO_BIRD/3UKX.pdb data/bio_assembly/NO_BIRD/3UKX.pdb C
|
||||
data/bio_assembly/NO_BIRD/2VAY.pdb data/bio_assembly/NO_BIRD/2VAY.pdb B
|
||||
data/bio_assembly/NO_BIRD/5UW3.pdb data/bio_assembly/NO_BIRD/5UW3.pdb E
|
||||
data/bio_assembly/NO_BIRD/5U1Q.pdb data/bio_assembly/NO_BIRD/5U1Q.pdb L
|
||||
data/bio_assembly/NO_BIRD/4ZRT.pdb data/bio_assembly/NO_BIRD/4ZRT.pdb B
|
||||
data/bio_assembly/NO_BIRD/5EEL.pdb data/bio_assembly/NO_BIRD/5EEL.pdb L
|
||||
data/bio_assembly/NO_BIRD/5W4E.pdb data/bio_assembly/NO_BIRD/5W4E.pdb A
|
||||
data/bio_assembly/NO_BIRD/4NY3.pdb data/bio_assembly/NO_BIRD/4NY3.pdb C
|
||||
data/bio_assembly/NO_BIRD/4AKT.pdb data/bio_assembly/NO_BIRD/4AKT.pdb C
|
||||
data/bio_assembly/NO_BIRD/5XWR.pdb data/bio_assembly/NO_BIRD/5XWR.pdb C
|
||||
data/bio_assembly/NO_BIRD/2H4H.pdb data/bio_assembly/NO_BIRD/2H4H.pdb B
|
||||
data/bio_assembly/NO_BIRD/3AGY.pdb data/bio_assembly/NO_BIRD/3AGY.pdb C
|
||||
data/bio_assembly/NO_BIRD/3AGZ.pdb data/bio_assembly/NO_BIRD/3AGZ.pdb C
|
||||
data/bio_assembly/NO_BIRD/3TWS.pdb data/bio_assembly/NO_BIRD/3TWS.pdb E
|
||||
data/bio_assembly/NO_BIRD/3TWT.pdb data/bio_assembly/NO_BIRD/3TWT.pdb E
|
||||
data/bio_assembly/NO_BIRD/3TWV.pdb data/bio_assembly/NO_BIRD/3TWV.pdb E
|
||||
data/bio_assembly/NO_BIRD/4DRW.pdb data/bio_assembly/NO_BIRD/4DRW.pdb E
|
||||
data/bio_assembly/NO_BIRD/1EJ4.pdb data/bio_assembly/NO_BIRD/1EJ4.pdb B
|
||||
data/bio_assembly/NO_BIRD/6TWX.pdb data/bio_assembly/NO_BIRD/6TWX.pdb C
|
||||
data/bio_assembly/NO_BIRD/5K4F.pdb data/bio_assembly/NO_BIRD/5K4F.pdb C
|
||||
data/bio_assembly/NO_BIRD/1XJ7.pdb data/bio_assembly/NO_BIRD/1XJ7.pdb B
|
||||
data/bio_assembly/NO_BIRD/1WBP.pdb data/bio_assembly/NO_BIRD/1WBP.pdb B
|
||||
data/bio_assembly/NO_BIRD/1KA6.pdb data/bio_assembly/NO_BIRD/1KA6.pdb B
|
||||
data/bio_assembly/NO_BIRD/6CDG.pdb data/bio_assembly/NO_BIRD/6CDG.pdb B
|
||||
data/bio_assembly/NO_BIRD/5N7F.pdb data/bio_assembly/NO_BIRD/5N7F.pdb C
|
||||
data/bio_assembly/NO_BIRD/6CD8.pdb data/bio_assembly/NO_BIRD/6CD8.pdb C
|
||||
data/bio_assembly/NO_BIRD/5N7D.pdb data/bio_assembly/NO_BIRD/5N7D.pdb C
|
||||
data/bio_assembly/NO_BIRD/2IG0.pdb data/bio_assembly/NO_BIRD/2IG0.pdb B
|
||||
data/bio_assembly/NO_BIRD/2RLY.pdb data/bio_assembly/NO_BIRD/2RLY.pdb P
|
||||
data/bio_assembly/NO_BIRD/5D94.pdb data/bio_assembly/NO_BIRD/5D94.pdb B
|
||||
data/bio_assembly/NO_BIRD/5IC3.pdb data/bio_assembly/NO_BIRD/5IC3.pdb C
|
||||
data/bio_assembly/NO_BIRD/3HS8.pdb data/bio_assembly/NO_BIRD/3HS8.pdb P
|
||||
data/bio_assembly/NO_BIRD/3HS9.pdb data/bio_assembly/NO_BIRD/3HS9.pdb P
|
||||
data/bio_assembly/NO_BIRD/3EG6.pdb data/bio_assembly/NO_BIRD/3EG6.pdb C
|
||||
data/bio_assembly/NO_BIRD/3L3Q.pdb data/bio_assembly/NO_BIRD/3L3Q.pdb B
|
||||
data/bio_assembly/NO_BIRD/3O71.pdb data/bio_assembly/NO_BIRD/3O71.pdb B
|
||||
data/bio_assembly/NO_BIRD/3RZ9.pdb data/bio_assembly/NO_BIRD/3RZ9.pdb B
|
||||
data/bio_assembly/NO_BIRD/3RZ2.pdb data/bio_assembly/NO_BIRD/3RZ2.pdb C
|
||||
data/bio_assembly/NO_BIRD/3RZX.pdb data/bio_assembly/NO_BIRD/3RZX.pdb B
|
||||
data/bio_assembly/NO_BIRD/4HH6.pdb data/bio_assembly/NO_BIRD/4HH6.pdb Z
|
||||
data/bio_assembly/NO_BIRD/4GQ6.pdb data/bio_assembly/NO_BIRD/4GQ6.pdb B
|
||||
data/bio_assembly/NO_BIRD/3WA4.pdb data/bio_assembly/NO_BIRD/3WA4.pdb B
|
||||
data/bio_assembly/NO_BIRD/3ZMP.pdb data/bio_assembly/NO_BIRD/3ZMP.pdb C
|
||||
data/bio_assembly/NO_BIRD/3UL1.pdb data/bio_assembly/NO_BIRD/3UL1.pdb A
|
||||
data/bio_assembly/NO_BIRD/5GG4.pdb data/bio_assembly/NO_BIRD/5GG4.pdb E
|
||||
data/bio_assembly/NO_BIRD/5GJH.pdb data/bio_assembly/NO_BIRD/5GJH.pdb B
|
||||
data/bio_assembly/NO_BIRD/4QE8.pdb data/bio_assembly/NO_BIRD/4QE8.pdb C
|
||||
data/bio_assembly/NO_BIRD/4QE6.pdb data/bio_assembly/NO_BIRD/4QE6.pdb B
|
||||
data/bio_assembly/NO_BIRD/5E6Q.pdb data/bio_assembly/NO_BIRD/5E6Q.pdb A
|
||||
data/bio_assembly/NO_BIRD/5EOD.pdb data/bio_assembly/NO_BIRD/5EOD.pdb B
|
||||
data/bio_assembly/NO_BIRD/4LP9.pdb data/bio_assembly/NO_BIRD/4LP9.pdb I
|
||||
data/bio_assembly/NO_BIRD/4M91.pdb data/bio_assembly/NO_BIRD/4M91.pdb B
|
||||
data/bio_assembly/NO_BIRD/4M92.pdb data/bio_assembly/NO_BIRD/4M92.pdb B
|
||||
data/bio_assembly/NO_BIRD/5W4F.pdb data/bio_assembly/NO_BIRD/5W4F.pdb A
|
||||
data/bio_assembly/NO_BIRD/4O56.pdb data/bio_assembly/NO_BIRD/4O56.pdb B
|
||||
data/bio_assembly/NO_BIRD/4YOS.pdb data/bio_assembly/NO_BIRD/4YOS.pdb E
|
||||
data/bio_assembly/NO_BIRD/4Z63.pdb data/bio_assembly/NO_BIRD/4Z63.pdb P
|
||||
data/bio_assembly/NO_BIRD/2YJD.pdb data/bio_assembly/NO_BIRD/2YJD.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X3O.pdb data/bio_assembly/NO_BIRD/4X3O.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X3P.pdb data/bio_assembly/NO_BIRD/4X3P.pdb C
|
||||
data/bio_assembly/NO_BIRD/2H9P.pdb data/bio_assembly/NO_BIRD/2H9P.pdb B
|
||||
data/bio_assembly/NO_BIRD/2H9N.pdb data/bio_assembly/NO_BIRD/2H9N.pdb B
|
||||
data/bio_assembly/NO_BIRD/1LKL.pdb data/bio_assembly/NO_BIRD/1LKL.pdb B
|
||||
data/bio_assembly/NO_BIRD/1LKK.pdb data/bio_assembly/NO_BIRD/1LKK.pdb B
|
||||
data/bio_assembly/NO_BIRD/3IOL.pdb data/bio_assembly/NO_BIRD/3IOL.pdb B
|
||||
data/bio_assembly/NO_BIRD/5DNJ.pdb data/bio_assembly/NO_BIRD/5DNJ.pdb B
|
||||
data/bio_assembly/NO_BIRD/6P5L.pdb data/bio_assembly/NO_BIRD/6P5L.pdb D
|
||||
data/bio_assembly/NO_BIRD/6Y4Q.pdb data/bio_assembly/NO_BIRD/6Y4Q.pdb C
|
||||
data/bio_assembly/NO_BIRD/1QKB.pdb data/bio_assembly/NO_BIRD/1QKB.pdb B
|
||||
data/bio_assembly/NO_BIRD/1QKA.pdb data/bio_assembly/NO_BIRD/1QKA.pdb B
|
||||
data/bio_assembly/NO_BIRD/1E6I.pdb data/bio_assembly/NO_BIRD/1E6I.pdb P
|
||||
data/bio_assembly/NO_BIRD/6RJP.pdb data/bio_assembly/NO_BIRD/6RJP.pdb C
|
||||
data/bio_assembly/NO_BIRD/1OHE.pdb data/bio_assembly/NO_BIRD/1OHE.pdb B
|
||||
data/bio_assembly/NO_BIRD/1Q1S.pdb data/bio_assembly/NO_BIRD/1Q1S.pdb A
|
||||
data/bio_assembly/NO_BIRD/1G5J.pdb data/bio_assembly/NO_BIRD/1G5J.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JEV.pdb data/bio_assembly/NO_BIRD/1JEV.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JEU.pdb data/bio_assembly/NO_BIRD/1JEU.pdb B
|
||||
data/bio_assembly/NO_BIRD/1JET.pdb data/bio_assembly/NO_BIRD/1JET.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B32.pdb data/bio_assembly/NO_BIRD/1B32.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B46.pdb data/bio_assembly/NO_BIRD/1B46.pdb B
|
||||
data/bio_assembly/NO_BIRD/1B9J.pdb data/bio_assembly/NO_BIRD/1B9J.pdb B
|
||||
data/bio_assembly/NO_BIRD/6JXU.pdb data/bio_assembly/NO_BIRD/6JXU.pdb B
|
||||
data/bio_assembly/NO_BIRD/6EJ8.pdb data/bio_assembly/NO_BIRD/6EJ8.pdb B
|
||||
data/bio_assembly/NO_BIRD/6EJ9.pdb data/bio_assembly/NO_BIRD/6EJ9.pdb B
|
||||
data/bio_assembly/NO_BIRD/1O6P.pdb data/bio_assembly/NO_BIRD/1O6P.pdb C
|
||||
data/bio_assembly/NO_BIRD/5OK6.pdb data/bio_assembly/NO_BIRD/5OK6.pdb C
|
||||
data/bio_assembly/NO_BIRD/2IV8.pdb data/bio_assembly/NO_BIRD/2IV8.pdb P
|
||||
data/bio_assembly/NO_BIRD/2OY2.pdb data/bio_assembly/NO_BIRD/2OY2.pdb W
|
||||
data/bio_assembly/NO_BIRD/2OXW.pdb data/bio_assembly/NO_BIRD/2OXW.pdb X
|
||||
data/bio_assembly/NO_BIRD/2O5G.pdb data/bio_assembly/NO_BIRD/2O5G.pdb B
|
||||
data/bio_assembly/NO_BIRD/3GLU.pdb data/bio_assembly/NO_BIRD/3GLU.pdb B
|
||||
data/bio_assembly/NO_BIRD/2Y1N.pdb data/bio_assembly/NO_BIRD/2Y1N.pdb B
|
||||
data/bio_assembly/NO_BIRD/3FDL.pdb data/bio_assembly/NO_BIRD/3FDL.pdb B
|
||||
data/bio_assembly/NO_BIRD/3JZO.pdb data/bio_assembly/NO_BIRD/3JZO.pdb P
|
||||
data/bio_assembly/NO_BIRD/3PDH.pdb data/bio_assembly/NO_BIRD/3PDH.pdb D
|
||||
data/bio_assembly/NO_BIRD/3RC0.pdb data/bio_assembly/NO_BIRD/3RC0.pdb P
|
||||
data/bio_assembly/NO_BIRD/4FII.pdb data/bio_assembly/NO_BIRD/4FII.pdb B
|
||||
data/bio_assembly/NO_BIRD/3ZMQ.pdb data/bio_assembly/NO_BIRD/3ZMQ.pdb C
|
||||
data/bio_assembly/NO_BIRD/3ZRJ.pdb data/bio_assembly/NO_BIRD/3ZRJ.pdb X
|
||||
data/bio_assembly/NO_BIRD/3SRJ.pdb data/bio_assembly/NO_BIRD/3SRJ.pdb C
|
||||
data/bio_assembly/NO_BIRD/5FOS.pdb data/bio_assembly/NO_BIRD/5FOS.pdb C
|
||||
data/bio_assembly/NO_BIRD/5GH9.pdb data/bio_assembly/NO_BIRD/5GH9.pdb B
|
||||
data/bio_assembly/NO_BIRD/5TWH.pdb data/bio_assembly/NO_BIRD/5TWH.pdb E
|
||||
data/bio_assembly/NO_BIRD/5TYI.pdb data/bio_assembly/NO_BIRD/5TYI.pdb L
|
||||
data/bio_assembly/NO_BIRD/5UW5.pdb data/bio_assembly/NO_BIRD/5UW5.pdb E
|
||||
data/bio_assembly/NO_BIRD/5UW7.pdb data/bio_assembly/NO_BIRD/5UW7.pdb C
|
||||
data/bio_assembly/NO_BIRD/5K9S.pdb data/bio_assembly/NO_BIRD/5K9S.pdb B
|
||||
data/bio_assembly/NO_BIRD/5AFG.pdb data/bio_assembly/NO_BIRD/5AFG.pdb B
|
||||
data/bio_assembly/NO_BIRD/4QSY.pdb data/bio_assembly/NO_BIRD/4QSY.pdb B
|
||||
data/bio_assembly/NO_BIRD/5VLA.pdb data/bio_assembly/NO_BIRD/5VLA.pdb Z
|
||||
data/bio_assembly/NO_BIRD/5VTB.pdb data/bio_assembly/NO_BIRD/5VTB.pdb B
|
||||
data/bio_assembly/NO_BIRD/4O6W.pdb data/bio_assembly/NO_BIRD/4O6W.pdb C
|
||||
data/bio_assembly/NO_BIRD/4Y6L.pdb data/bio_assembly/NO_BIRD/4Y6L.pdb C
|
||||
data/bio_assembly/NO_BIRD/4Z2V.pdb data/bio_assembly/NO_BIRD/4Z2V.pdb C
|
||||
data/bio_assembly/NO_BIRD/2Z3L.pdb data/bio_assembly/NO_BIRD/2Z3L.pdb C
|
||||
data/bio_assembly/NO_BIRD/2Z3N.pdb data/bio_assembly/NO_BIRD/2Z3N.pdb C
|
||||
data/bio_assembly/NO_BIRD/4X6S.pdb data/bio_assembly/NO_BIRD/4X6S.pdb L
|
||||
data/bio_assembly/NO_BIRD/4OKF.pdb data/bio_assembly/NO_BIRD/4OKF.pdb A
|
||||
data/bio_assembly/NO_BIRD/6HON.pdb data/bio_assembly/NO_BIRD/6HON.pdb B
|
||||
data/bio_assembly/NO_BIRD/6HOM.pdb data/bio_assembly/NO_BIRD/6HOM.pdb B
|
||||
data/bio_assembly/NO_BIRD/6HV2.pdb data/bio_assembly/NO_BIRD/6HV2.pdb B
|
||||
data/bio_assembly/NO_BIRD/5X7B.pdb data/bio_assembly/NO_BIRD/5X7B.pdb L
|
||||
47
data/pdb_manager.py
Normal file
47
data/pdb_manager.py
Normal file
@@ -0,0 +1,47 @@
|
||||
import os
|
||||
import shutil
|
||||
import fnmatch
|
||||
from os import path
|
||||
import pandas as pd
|
||||
|
||||
def main():
|
||||
|
||||
out_path = "bio_assembly/BIRD"
|
||||
|
||||
doss = "bio_assembly/BIRD"
|
||||
write_path = "data/bio_assembly/NO_BIRD/"
|
||||
# rename the original file
|
||||
#result = find_files("*.pdb",doss)
|
||||
my_cols = [str(i) for i in range(45)]
|
||||
|
||||
data = pd.read_csv('non_BIRD.csv',sep=';|,|\t',names= my_cols,engine='python')
|
||||
|
||||
|
||||
|
||||
write_txt(data,write_path)
|
||||
'''for files in result:
|
||||
os.rename(files,out_path+files[len(doss):-1]) '''
|
||||
|
||||
'''result = find_files("*.pdb*","RCSB_test1")
|
||||
for files in result:
|
||||
os.remove(files)'''
|
||||
|
||||
|
||||
def find_files(pattern, search_path):
|
||||
result = []
|
||||
# Wlaking top-down from the root
|
||||
for root, dir, files in os.walk(search_path):
|
||||
for filename in files:
|
||||
if fnmatch.fnmatch(filename, pattern):
|
||||
result.append(os.path.join(root, filename))
|
||||
return result
|
||||
|
||||
|
||||
def write_txt(data,write_path):
|
||||
file = open('non_bird_test.txt','w+')
|
||||
for i in range(len(data)):
|
||||
file.write(write_path+str(data['0'][i])+'.pdb'+' '+write_path+str(data['0'][i])+'.pdb'+' '+ str(data['1'][i])+'\n')
|
||||
file.close()
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
27
data/peptide-test.txt
Normal file
27
data/peptide-test.txt
Normal file
@@ -0,0 +1,27 @@
|
||||
data/peptide_data/3uqp.pdb data/peptide_data/3uqp.pdb B
|
||||
data/peptide_data/3uri.pdb data/peptide_data/3uri.pdb B
|
||||
data/peptide_data/4rcp.pdb data/peptide_data/4rcp.pdb B
|
||||
data/peptide_data/4tpg.pdb data/peptide_data/4tpg.pdb E
|
||||
data/peptide_data/5jxh.pdb data/peptide_data/5jxh.pdb H
|
||||
data/peptide_data/4o6w.pdb data/peptide_data/4o6w.pdb C
|
||||
data/peptide_data/4k1e.pdb data/peptide_data/4k1e.pdb B
|
||||
data/peptide_data/4dv9.pdb data/peptide_data/4dv9.pdb B
|
||||
data/peptide_data/4fbx.pdb data/peptide_data/4fbx.pdb B
|
||||
data/peptide_data/4g35.pdb data/peptide_data/4g35.pdb B
|
||||
data/peptide_data/5dnj.pdb data/peptide_data/5dnj.pdb B
|
||||
data/peptide_data/4whh.pdb data/peptide_data/4whh.pdb B
|
||||
data/peptide_data/4whk.pdb data/peptide_data/4whk.pdb B
|
||||
data/peptide_data/4whl.pdb data/peptide_data/4whl.pdb B
|
||||
data/peptide_data/1sfi.pdb data/peptide_data/1sfi.pdb I
|
||||
data/peptide_data/3rq7.pdb data/peptide_data/3rq7.pdb B
|
||||
data/peptide_data/3sna.pdb data/peptide_data/3sna.pdb H
|
||||
data/peptide_data/3snb.pdb data/peptide_data/3snb.pdb H
|
||||
data/peptide_data/3snc.pdb data/peptide_data/3snc.pdb H
|
||||
data/peptide_data/3snd.pdb data/peptide_data/3snd.pdb C
|
||||
data/peptide_data/1okx.pdb data/peptide_data/1okx.pdb C
|
||||
data/peptide_data/3s70.pdb data/peptide_data/3s70.pdb B
|
||||
data/peptide_data/3snd.pdb data/peptide_data/3snd.pdb D
|
||||
data/peptide_data/1okx.pdb data/peptide_data/1okx.pdb D
|
||||
data/peptide_data/3s70.pdb data/peptide_data/3s70.pdb D
|
||||
data/peptide_data/1okx1.pdb data/peptide_data/1okx1.pdb C
|
||||
data/peptide_data/1okx1.pdb data/peptide_data/1okx1.pdb C
|
||||
26
run_tests.py
Normal file
26
run_tests.py
Normal file
@@ -0,0 +1,26 @@
|
||||
from multiprocessing import Pool
|
||||
import subprocess
|
||||
import os
|
||||
import time
|
||||
|
||||
|
||||
def run_command(mr):
|
||||
max_rads = [6.2,7.0,7.8,8.6,9.4,10.2]
|
||||
clust_methods = ['s','m','a']
|
||||
#max_rad = 6.2
|
||||
#clust_method = 's'
|
||||
distance = 2.4
|
||||
|
||||
for max_rad in max_rads:
|
||||
for clust_method in clust_methods:
|
||||
command = "bin/tpocket -L data/bird_test.txt -m {} -M {} -C {} -D {} -o result_stats/m{}_M{}_C{}_D{}_stats_p -g result_stats/m{}_M{}_C{}_D{}_stats_g".format(mr,max_rad,clust_method,distance,mr,max_rad,clust_method,distance,mr,max_rad,clust_method,distance)
|
||||
subprocess.Popen(command, shell=True)
|
||||
|
||||
|
||||
|
||||
def main():
|
||||
min_rad = [3.4,3.6,3.8,4.0,4.2,4.4,4.6]
|
||||
pool = Pool()
|
||||
pool.map(run_command,min_rad)
|
||||
|
||||
main()
|
||||
Reference in New Issue
Block a user